TABLE 2.
List of all 86 wheat-T. urartu DH lines showing the linkage groups detected in each line via the Axiom array and KASP markers and the name of the unique introgression (corresponding to Figure 1) and its potential location in the wheat genome.
DH line number(s) | LG of Tu segment(s) from array genotyping | LG of Tu segment(s) from KASP genotyping (number of segments from that LG when more than 1) | Name of segment(s) corresponding to Figure 1, identified through KASP genotyping | Wheat chromosome potentially present in the recombinant |
208 | 3, 6, 7 | 3, 5, 6, 7 | 3A.2, 5A.11, 6A.4, 7A.7 | 3A, 5A, 6A, 7A |
209 | 2, 5, 6 | 2, 5(2), 6 | 2A.3, 5A.4, 5A.10, 6A.4 | 2A, 5A, 5A, 6A |
210 | 2, 3, 5, 7 | 2, 3, 5(2), 7 | 2A.3, 3A.7, 5A.4, 5A.9, 7A.11 | 2A, 3A, 5A, 5A, 7A |
212 | 2, 5 | 2 | 2A.2 | 2A |
213 | 3, 5 | 1, 3, 5 | 1A.2, 3A.1, 5A.12 | 1A, 3A, 5A |
214 | 2, 3, 5, 6 | 2, 3, 5(2), 6 | 2A.3, 3A.3, 5A.4, 5A.9, 6A.4 | 2A, 3A, 5A, 5A, 6A |
215; 219; 222; 226; 229 | 6, 7 | 6, 7 | 6A.4, 7A.8 | 6A, 7A |
232 | 3, 5, 7 | 3, 5, 7 | 3A.2, 5A.13, 7A.12 | 3A, 5A, 7A |
336 | 3, 5, 7 | 3, 5(2), 7 | 3A.2, 5A.4, 5A.13, 7A.12 | 3A, 5A, 5A,7A |
233 | 5, 7 | 5, 7 | 5A.8, 7A.14 | 5D, 7B |
234; 253 | 5 | 5 (2) | 5A.13, 5A.13, | 5A, 5D |
235; 247 | 5 | 5, 7 | 5A.13, 7A.12 | 5D, 7A |
240 | 5 | 5 | 5A.8 | 5D |
242; 244 | 5, 7 | 5(3), 7 | 5A.4, 5A.8, 5A.13, 7A.14 | 5A, 5A, 5D, 7B |
243 | 5, 7 | 5(3), 7(2) | 5A.4, 5A.8, 5A.13, 7A.12, 7A.14 | 5A, 5A, 7A, 7B |
248; 254 | 5 | 5(3) | 5A.4, 5A.13, 5A.13 | 5A, 5A, 5D |
249; 257 | 5 | 5(2), 7 | 5A.4, 5A.8, 7A.12 | 5A, 5A, 7A |
255 | 5 | 5(2), 7 | 5A.4, 5A.8, 7A.12 | 5A, 5D, 7A |
259 | 5, 7 | 5, 7(2) | 5A.13, 7A.12, 7A.14 | 5D, 7A, 7B |
261 | 3 | 3 | 3A.1 | 3A |
263 | 6, 7 | 6, 7 | 6A.5, 7A.9 | 6A, 7A |
266 | 6, 7 | 5, 6, 7 | 5A.13, 6A.5, 7A.9 | 5A, 6A, 7A |
268 | 3, 7 | 3, 7 | 3A.1, 7A.9 | 3A, 7A |
270 | 5, 6 | 5, 6 | 5A.2, 6A.2 | 5A, 6A, 7A |
271 | 3, 5 | 3(2), 5 | 3A.4, 3A.5, 5A.7 | 3D, 3D, 5A |
272 | 3, 7 | 1, 3(2), 7 | 1A.3, 3A.4, 3A.7, 7A.2 | 1A, 3A, 3A, 7A |
273 | 3 | 3(2) | 3A.4, 3A.5 | 3D, 3D |
274 | 3, 7 | 3, 7 | 3A.1, 7A.4 | 3A, 7A |
275 | 3, 7 | 1, 3, 7 | 1A.3, 3A.5, 7A.4 | 1A, 3D, 7A |
276 | 3, 7 | 3(2), 7 | 3A.4, 3A.5, 6A.4, 7A.2 | 3D, 3D, 6A, 7A |
277 | 1, 6 | 1, 2, 6(3) | 1A.5, 2A.10, 6A.6, 6A.7, 6A.9 | 1A, 2A, 6A, 6A, 6A |
278 | 1, 2, 6 | 1, 2, 6 | 1A.4, 2A.1, 6A.12 | 1*, 2A, 6A |
281 | 3, 7 | 3, 7(2) | 3A.7, 7A.2, 7A.15 | 3A, 7A, 7B |
282 | 3, 4, 7 | 3, 4, 7(2) | 3A.7, 4A.1, 7A.11, 7A.15 | 3A, 4D, 7A, 7A |
283 | 3 | 3 | 3A.7 | 3A |
284 | 5 | 5 | 5A.9 | 5A |
285 | 2 | 2 | 2A.4 | 2A |
286 | 2, 5, 7 | 2, 5, 7 | 2A.4, 5A.5, 7A.5 | 2A, 5A, 7A |
353 | 3, 5, 7 | 3, 5, 7 | 3A.7, 5A.4, 7A.3 | 3A, 5A, 7A |
288 | 4, 6 | 4, 6 | 4A.1, 6A.4 | 4D, 6A |
289 | 2, 5, 7 | 2, 5, 7 | 2A.4, 5A.6, 7A.6 | 2A, 5A, 7A |
291 | 2, 5 | 2, 5(2) | 2A.4, 5A.6, 5A.13 | 2A, 5A, 7A |
292 | 2 | 2, 5, 7 | 2A.4, 5A.14, 7A.15 | 2A, 5A, 7B |
293 | 2, 5 | 2, 5, 7 | 2A.4, 5A.6, 7A.15 | 2A, 5A, 7B |
294 | 2, 7 | 2, 7(2) | 2A.4, 7A.6, 7A. 15 | 2A, 7A, 7B |
295 | 7 | 5, 7(2) | 5A.13, 7A.6, 7A.15 | 5A, 7A, 7B |
296 | 2, 5, 7 | 2, 5(2), 7 | 2A.4, 5A.6, 5A.13, 7A.6 | 2A, 5A, 5A, 7A |
297 | 2, 5, 7 | 2, 5, 7(2) | 2A.4, 5A.13, 7A.6, 7A.15 | 2A, 5A, 7A, 7B |
298 | 5 | 5(2) | 5A.6, 5A.13 | 5A, 5A |
299 | 5, 7 | 5(2), 7(2) | 5A.6, 5A.12, 7A.6, 7A.15 | 5A, 5A, 7A, 7B |
300 | 2, 5, 7 | 2, 5, 7(2) | 2A.4, 5A.6, 7A.6, 7A.15 | 2A, 5A, 7A, 7B |
301 | 2, 7 | 2, 7 | 2A.4, 7A.6 | 2A, 7A |
302 | 5 | – | – | – |
303: 305 | 7 | 7 | 7A.10 | 7A |
304 | 2, 5 | 2 | 2A.1 | 2A |
306 | 1, 2 | 1, 2, 7 | 1A.2, 2A.5, 7A.13 | 1A, 2A, 7A |
307 | 1, 5 | 1, 5, 7 | 1A.2, 5A.4, 7A.13 | 1A, 5A, 7A |
308; 310 | 5 | 5 | 5A.4 | 5A |
309; 312 | 1, 5 | 1, 5 | 1A.2, 5A.4 | 1A, 5A |
311 | 1, 2, 5 | 1, 2, 5, 7 | 1A.2, 2A.5, 5A.4, 7A.13 | 1A, 2A, 5A, 7A |
313 | 1 | 1 | 1A.2 | 1A |
314 | 1, 2, 5 | 1, 2, 5 | 1A.2, 2A.5, 5A.4 | 1A, 2A, 5A |
315 | 2 | 1, 2 | 1A.2, 2A.5 | 1A, 2A |
316 | 2, 5, 6 | 2, 5, 6 | 2A.9, 5A.4, 6A.8 | 2A, 5A, 6A |
317 | 5 | 5(3) | 5A.1, 5A.3, 5A.4 | 5D, 5D, 5A |
318 | 2, 5 | 2, 5 | 2A.7, 5A.4 | 2A, 5A |
320 | 5 | 5 | 5A.4 | 5A |
321 | 1, 2, 5 | 1, 2, 5(3) | 1A.1, 2A.8, 5A.1, 5A.3, 5A.4 | 1A, 2A, 5D, 5D, 5A |
324; 325, 329 | 2 | 2 | 2A.6 | Whole |
326; 328 | 5 | – | – | – |
327 | 2, 5 | 2 | 2A.6 | Whole |
*Wheat subgenome cannot be confirmed through KASP genotyping.