TABLE 1.
GenBank accession numbers and culture collection numbers of species included in the present phylogenetic study.
Species | Culture collection/voucher no. | GenBank accession numbers |
||
LSU | SSU | ITS | ||
Alloleptosphaeria italica | MFLUCC 14-0934T | KT454714 | N/A | KT454722 |
Alternariaster bidentis | CBS 134021T | KC609341 | N/A | KC609333 |
Alternariaster centaureae-diffusae | MFLUCC 14-0992T | KT454715 | KT454730 | KT454723 |
MFLUCC 15-0009 | KT454716 | KT454731 | KT454724 | |
Alternariaster helianthi | CBS 327.69 | KC584369 | KC584627 | KC609335 |
Didymella exigua | CBS 183.55NT | EU754155 | EU754056 | GU237794 |
Heterosporicola chenopodii | CBS 115.96 | EU754188 | EU754089 | JF740227 |
CBS 448.68ET | EU754187 | EU754088 | FJ427023 | |
Heterosporicola dimorphospora | CBS 165.78 | JF740281 | JF740098 | JF740204 |
CBS 345.78ET | GU238069 | GU238213 | NR111618 | |
Leptosphaeria cichorii | MFLUCC 14-1063T | KT454712 | KT454728 | KT454720 |
Leptosphaeria conoidea | CBS 616.75 | MH872726 | JF740099 | MH860957 |
Leptosphaeria doliolum | MFLU 15-1875 | KT454719 | KT454734 | KT454727 |
CBS 155.94 | JF740282 | N/A | JF740207 | |
CBS 505.75IT | GQ387576 | GQ387515 | JF740205 | |
CBS 541.66 | JF740284 | N/A | JF740206 | |
Leptosphaeria slovacica | CBS 125975 | JF740316 | N/A | JF740248 |
CBS 389.80 | JF740315 | JF740101 | JF740247 | |
Neoleptosphaeria rubefaciens | CBS 223.77 | JF740312 | N/A | JF740243 |
CBS 387.80 | JF740311 | N/A | JF740242 | |
Ochraceocephala foeniculi | CBS 145654T | MN516774 | MN516743 | MN516753 |
Paraleptosphaeria dryadis | CBS 643.86 | GU301828 | KC584632 | JF740213 |
Paraleptosphaeria macrospora | CBS 114198 | MH874520 | N/A | MH862957 |
Paraleptosphaeria nitschkei | CBS 306.51ET | JF740308 | N/A | JF740239 |
MFLU 13-0688 | KR025864 | N/A | KR025860 | |
Paraleptosphaeria orobanches | CBS 101638T | JF740299 | N/A | JF740230 |
Paraleptosphaeria praetermissa | CBS 114591 | JF740310 | N/A | JF740241 |
Paraleptosphaeria rubi | MFLUCC 14-0211T | KT454718 | KT454733 | KT454726 |
Paraphoma radicina | CBS 111.79ET | EU754191 | EU754092 | FJ427058 |
Phaeosphaeria oryzae | CBS 110110ET | GQ387591 | GQ387530 | KF251186 |
Plenodomus agnitus | CBS 121.89 | JF740271 | N/A | JF740194 |
CBS 126584 | JF740272 | N/A | JF740195 | |
Plenodomus artemisiae | KUMCC 18-0151T | MK387958 | MK387928 | MK387920 |
KUMCC 20-0200A | MT957055 | MT957048 | MT957062 | |
KUMCC 20-0200B | MT957056 | MT957049 | MT957063 | |
Plenodomus biglobosus | CBS 119951 | JF740274 | JF740102 | JF740198 |
CBS 127249 | JF740275 | N/A | JF740199 | |
Plenodomus chrysanthemi | CBS 539.63T | GU238151 | GU238230 | NR111622 |
Plenodomus collinsoniae | CBS 120227 | JF740276 | N/A | JF740200 |
Plenodomus confertus | CBS 375.64 | JF740277 | N/A | AF439459 |
Plenodomus congestus | CBS 244.64T | JF740278 | N/A | AF439460 |
Plenodomus deqinensis | CGMCC 3.18221T | KY064031 | N/A | KY064027 |
Plenodomus enteroleucus | CBS 142.84ET | JF740287 | N/A | JF740214 |
CBS 831.84 | JF740288 | N/A | JF740215 | |
Plenodomus fallaciosus | CBS 414.62 | JF740292 | N/A | JF740222 |
Plenodomus guttulatus | MFLU 15-1876T* | KT454713 | KT454729 | KT454721 |
Plenodomus hendersoniae | CBS 113702 | MH874506 | N/A | MH862939 |
Plenodomus influorescens | CBS 143.84 | JF740297 | N/A | JF740228 |
Plenodomus libanotidis | CBS 113795 | MH874508 | N/A | MH862943 |
Plenodomus lijiangensis | KUMCC 18-0186T | MK387959 | MK387929 | MK387921 |
Plenodomus lindquistii | CBS 386.80 | JF740301 | N/A | JF740232 |
Plenodomus lingam | CBS 260.94 | JF740307 | N/A | JF740235 |
Plenodomus lupini | CBS 248.92 | JF740303 | N/A | JF740236 |
Plenodomus pimpinellae | CBS 101637T | MH874352 | N/A | JF740240 |
Plenodomus salviae | MFLUCC 13-0219T | KT454717 | KT454732 | KT454725 |
Plenodomus sinensis | KUMCC 18-0152 | MK387961 | MK387931 | MK387923 |
KUMCC 18-0153 | MK387960 | MK387930 | MK387922 | |
KUMCC 20-0204 | MT957057 | MT957050 | MT957064 | |
KUN-HKAS 102227 | MK387962 | MK387932 | MK387924 | |
MFLU 17-0757PT* | MF072718 | MF072720 | MF072722 | |
MFLU 17-0767T* | MF072717 | MF072719 | MF072721 | |
Plenodomus tracheiphilus | CBS 127250 | JF740318 | N/A | JF740250 |
Plenodomus triseptatus | MFLUCC 17-1345T | MN648451 | MN648453 | MN648452 |
Plenodomus visci | CBS 122783T | EU754195 | EU754096 | NR119957 |
Plenodomus wasabiae | CBS 120119 | JF740323 | N/A | JF740257 |
Praeclarispora artemisiae | KUMCC 20-0201AT | MT957053 | MT957046 | MT957060 |
KUMCC 20-0201BT | MT957054 | MT957047 | MT957061 | |
Pseudoleptosphaeria etheridgei | CBS 125980T | JF740291 | N/A | JF740221 |
Querciphoma carteri | CBS 101633 | GQ387593 | GQ387532 | KF251210 |
CBS 105.91 | GQ387594 | GQ387533 | KF251209 | |
Sclerenchymomyces clematidis | MFLUCC 17–2180T | MT214558 | MT226675 | MT310605 |
Sclerenchymomyces jonesii | MFLUCC 16-1442T | KY211870 | KY211871 | KY211869 |
Sphaerellopsis artemisiae | KUMCC 20-0202AT | MT957058 | MT957051 | MT957065 |
KUMCC 20-0202BT | MT957059 | MT957052 | MT957066 | |
Sphaerellopsis filum | CBS 234.51 | KP170723 | N/A | KP170655 |
CBS 235.51 | KP170724 | N/A | KP170656 | |
CBS 317.68NT | KP170725 | N/A | KP170657 | |
Sphaerellopsis hakeae | CPC 29566T | KY173555 | N/A | KY173466 |
Sphaerellopsis isthmospora | HKAS 102225AT* | MK387963 | MK387933 | MK387925 |
HKAS 102225BT* | MK387964 | MK387934 | MK387926 | |
Sphaerellopsis macroconidialis | CBS 233.51 | KP170726 | N/A | KP170658 |
CBS 658.78T | KP170727 | N/A | KP170659 | |
CPC 21113 | KP170728 | N/A | KP170660 | |
Sphaerellopsis paraphysata | CPC 21841T | KP170729 | N/A | KP170662 |
KUMCC 18-0195 | MK387965 | MK387935 | MK387927 | |
Subplenodomus apiicola | CBS 285.72 | GU238040 | GU238211 | JF740196 |
Subplenodomus drobnjacensis | CBS 270.92 | JF740286 | N/A | JF740212 |
Subplenodomus valerianae | CBS 499.91 | JF740319 | N/A | JF740252 |
CBS 630.68 | GU238150 | GU238229 | JF740251 | |
Subplenodomus violicola | CBS 306.68 | GU238156 | GU238231 | FJ427083 |
CBS, Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands; CGMCC, China General Microbiological Culture Collection Center, Beijing, China; CPC, Collection of Pedro Crous housed at CBS; HKAS, Herbarium of Cryptogams, Kunming Institute of Botany Academia Sinica, Yunnan, China; KUMCC, Kunming Institute of Botany Culture Collection, Chinese Science Academy, Kunming, China; MFLU, Mae Fah Luang University, Chiang Rai, Thailand.; MFLUCC, Mae Fah Luang University Culture Collection, Chiang Rai, Thailand. ET, ex-epitype; IT, ex-isotype; NT, ex-neotype; PT*, paratype; T, ex-type; T*, holotype. The newly generated sequences are shown in bold.