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. 2021 Apr 5;7(4):613–623. doi: 10.1021/acscentsci.0c01336

Table 1. Representative Proteins Showing Hyperreactivity (R < 2.0) with Scout Fragment Alkyne Probes KB02yne or KB05ynea.

gene protein scout fragment alkyne ratio IA-alkyne ratio liganded cysteine scout
AKR1B10 aldo-keto reductase family 1 member B10 0.6 (KB02yne) 3.2 C299 KB02
COG8 conserved oligomeric Golgi complex subunit 8 1.6 (KB02yne) 3.8 C96 KB02
DUS2L dihydrouridine synthase 2 1.0 (KB02yne) 3.6 C116 KB02
HELLS lymphoid-specific helicase 1.5 (KB02yne) 4.9 C836 KB02
WDR45B WD repeat domain phosphoinositide-interacting protein 3 1.1 (KB02yne) 4.3 C63 KB02
ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 1.1 (KB05yne) 3.3 C21 KB05
CDKN2AIP CDKN2A-interacting protein 1.5 (KB05yne) 6.5 C516 KB05
FAM40A protein FAM40A 1.4 (KB05yne) 3.4 C769 KB05
SLC4A11 sodium bicarbonate transporter-like protein 11 1.2 (KB05yne) 4.3 C170 KB05
SMARCD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 1.3 (KB05yne) 4.3 C460 KB05
a

Also shown are cysteine residues in these proteins found in previous chemical proteomic studies24,26,27,37,38 to be liganded by the corresponding scout fragments (KB02 or KB05, respectively).