TABLE 2.

Identified novel variants with genome-wide significant associations.

SNP	Nearest gene	Trait	Chromosome position	Minor allele	MAF	Discovery (n = 2,869)		Replication (n = 37,321)		Combination (n = 40,169)
						β ± SE	P value	β ± SE	P value	β ± SE	P value
rs1307273	RP11-513I15.6	Height–women	6:34240886	G	0.205	0.82 ± 0.17	9.27 × 10–7	0.33 ± 0.04	5.19 × 10–14	0.37 ± 0.04	3.37 × 10–17
rs9469757	RP11-513I15.6	Height–women	6:34232864	C	0.170	0.87 ± 0.18	1.16 × 10–6	0.37 ± 0.05	1.41 × 10–14	0.40 ± 0.05	3.10 × 10–17
rs1759637	RP11-513I15.6	Height–women	6:34237130	C	0.193	0.82 ± 0.17	1.62 × 10–6	0.32 ± 0.05	4.49 × 10–12	0.35 ± 0.04	8.54 × 10–15
rs7133285	RP11-977G19.10	Height–women	12:56699429	A	0.232	−0.75 ± 0.16	2.25 × 10–6	−0.67 ± 0.04	2.27 × 10–54	−0.67 ± 0.04	4.19 × 10–58
rs9469761	RP11-513I15.6	Height–women	6:34236429	A	0.169	0.85 ± 0.18	2.53 × 10–6	0.37 ± 0.05	1.38 × 10–14	0.40 ± 0.05	3.25 × 10–17
rs1776890	RP11-513I15.6	Height–women	6:34237747	G	0.194	0.79 ± 0.17	3.62 × 10–6	0.32 ± 0.05	9.86 × 10–13	0.35 ± 0.04	1.51 × 10–15
rs13207853	RP11-513I15.6	Height–women	6:34238946	C	0.181	0.81 ± 0.18	4.64 × 10–6	0.33 ± 0.05	1.57 × 10–12	0.37 ± 0.05	1.59 × 10–15
rs2797961	RP11-513I15.6	Height–women	6:34237797	G	0.205	0.77 ± 0.17	4.67 × 10–6	0.32 ± 0.04	6.31 × 10–13	0.35 ± 0.04	9.07 × 10–16
rs200808496	RP11-513I15.6	Height–women	6:34237376	T	0.203	0.75 ± 0.17	7.40 × 10–6	0.31 ± 0.04	9.98 × 10–12	0.33 ± 0.04	5.34 × 10–14

Age and residential area were included as covariants in all genetic models. Variants stated in the manuscript are indicated in bold. MAF, minor allele frequency; β, regression coefficient; SE, standard error; N, the number of participants included in each stage.