Table 5.
Ten-fold cross-validation of the TopNetTree on the SKEMPI 2.0 data set
| Rp | τ | RMSE (kcal/mol) | Rp | τ | RMSE (kcal/mol) | ||
|---|---|---|---|---|---|---|---|
| Fold 1 (Train) | 0.981 | 0.884 | 0.366 | Fold 6 (Train) | 0.983 | 0.904 | 0.353 |
| Fold 1 (Test) | 0.835 | 0.595 | 1.065 | Fold 6 (Test) | 0.836 | 0.594 | 1.064 |
| Fold 2 (Train) | 0.982 | 0.902 | 0.360 | Fold 7 (Train) | 0.983 | 0.904 | 0.356 |
| Fold 2 (Test) | 0.839 | 0.600 | 1.061 | Fold 7 (Test) | 0.838 | 0.594 | 1.060 |
| Fold 3 (Train) | 0.982 | 0.887 | 0.366 | Fold 8 (Train) | 0.979 | 0.878 | 0.392 |
| Fold 3 (Test) | 0.837 | 0.595 | 1.068 | Fold 8 (Test) | 0.840 | 0.596 | 1.061 |
| Fold 4 (Train) | 0.981 | 0.880 | 0.369 | Fold 9 (Train) | 0.982 | 0.902 | 0.362 |
| Fold 4 (Test) | 0.841 | 0.596 | 1.059 | Fold 9 (Test) | 0.838 | 0.596 | 1.069 |
| Fold 5 (Train) | 0.982 | 0.906 | 0.365 | Fold 10 (Train) | 0.982 | 0.886 | 0.367 |
| Fold 5 (Test) | 0.839 | 0.594 | 1.062 | Fold 10 (Test) | 0.835 | 0.596 | 1.064 |
| Average (Train) | 0.982 | 0.893 | 0.366 | ||||
| Average (Test) | 0.838 | 0.596 | 1.063 |
Abbreviation: RMSE, root mean square error.