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. 2021 May 17;21(10):3491. doi: 10.3390/s21103491

Table 7.

Primers and probe sequence orientation for recognition of SARS-CoV-2 virus RNA.

Name Target Genes Sequence 5′→3′ Nucleotide position Target Genes Sequence 5′→3′ Nucleotide Position
Forward Primer: ORF 1ab CCCTGTGGGTTTTACACTTAA 13342-13362 N gene GGGGAACTTCTCCTGCTAGAAT 28881-28902
Reverse Primer: ACGATTGTGCATCAGCTGA 13442-13460 CAG ACATTTTGCTCTCAAGCTG 28958-28979
Immobilized Mutant Probe (sh): FAM-CCGTCTGCGGTATGTGGAAAGGTTATGG-BHQ 13377-13404 FAM-TTGCTGCTGCTTGACAGATT-TAMRA 28934-28953
Matching type (mr) Sequence: TCCAACCTTTCCACATACCGCAGCGGA - AACTCTGTCAAGCAGCAGCAA -
Mismatching type (wt) Sequence: TCCAAGCAAACCCAATACCGCAGCGGA - AACTCTACTAATTAGCAGCAA -