3D	Three-dimensional
5-FU	Five-fluorouracil
ACPYPE	Ante-Chamber Python Parser interface
CHPC	Center for high performance computing
CPU	Central processing unit
DPD	Dihydropyrimidine dehydrogenase
FAD	Flavin adenine dinucleotide
FMN	Flavin mononucleotide
MCBP	Metal center parameter builder
MD	Molecular dynamics
MM	Molecular mechanics
NADP	Nicotinamide adenine dinucleotide phosphate
PBC	Periodic boundary conditions
PDB	Protein Data bank
PME	Particle mesh Ewald
RESP	Restricted electrostatic potential
QM	Quantum mechanics
URF	Five fluorouracil
VFFDT	Visual force field derivation toolkit
WT	Wild type