Table 5. F-values and corresponding degrees of freedom (DoF) of the two-way repeated measures ANOVA investigating the effects of the factors K (ratio between data samples and number of model parameters) and TYPE (estimator used, i.e., OLS or ANN) on the performance parameters of GC estimation (BIAS0, BIAS1) and of network reconstruction (FNR, FPR, AUC). ***p < 10−5; ** 10−5 < p < 0.01.
| Factors | DoF | BIAS0 | BIAS1 | FNR | FPR | AUC |
|---|---|---|---|---|---|---|
| TYPE | (1, 99) | 1,295*** | 3,518*** | 105.7*** | 491*** | 174.4*** |
| K | (2, 198) | 7,454*** | 1,196.2*** | 968.2*** | 111.1*** | 1,468*** |
| TYPE × K | (2, 198) | 6,770.5*** | 15.8** | 268.5*** | 69.5*** | 102.8*** |