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. 2020 Jan 23;11(9):2362–2368. doi: 10.1039/c9sc06017k

Conformational Gibbs energy of binding for protein–ligand complexes calculated using the MM(CGenFF) and NNP/MM methods. All energies are in kcal mol−1.

PDB ID ΔGcons,CGenFF ΔGcons,NNP/MM Charge
1XOZ 0.4 ± 0.0 0.5 ± 0.0 0
2W6N 4.7 ± 0.1 5.2 ± 0.1 0
3EYG 1.9 ± 0.1 1.0 ± 0.2 0
4HJO 13.0 ± 0.1 8.3 ± 0.1 0
4NCT 3.4 ± 0.1 2.3 ± 0.1 0
2HYY 8.1 ± 0.1 326.9 ± 0.1 1
3EIG 11.1 ± 0.0 37.7 ± 0.0 −2
3ETA 5.6 ± 0.1 15.2 ± 0.2 1