Table 2.
mRNA expression of 18 actionable immune genes in IBC versus normal breast
Genes |
IBC versus normal breast comparison |
||||
---|---|---|---|---|---|
Univariate | |||||
N | Normal (median, log2) | IBC (median, log2) | IBC vs. Normal Breast (log2-ratio) | p-value* | |
BTLA | 118 | 3.5 (3.22–4.18) | 3.54 (2.71–6.43) | 0.04 | 0.946 |
CD274 | 118 | 5.32 (5–5.48) | 5.51 (3.23–8.66) | 0.19 | 0.768 |
CD276 | 118 | 5.55 (5.49–5.91) | 4.93 (3.52–6.81) | −0.62 | 0.052 |
HAVCR2 | 118 | 5.94 (5.61–6.55) | 7.07 (5.27–9.20) | 1.13 | 7.57E-03 |
TIGIT | 118 | 3.96 (3.64–4.17) | 4.48 (2.91–7.06) | 0.52 | 0.056 |
TNFRSF18 | 118 | 4.59 (3.94–4.72) | 4.45 (3.21–8.17) | −0.14 | 0.958 |
VSIR | 118 | 8.09 (7.85–8.78) | 7.80 (5.66–9.68) | −0.29 | 0.293 |
CD27 | 141 | 5.42 (4.64–7.06) | 6.80 (4.63–12.4) | 1.38 | 2.84E-02 |
CD40 | 141 | 5.33 (5.05–5.97) | 6.05 (4.71–9.06) | 0.72 | 3.53E-02 |
CD70 | 141 | 3.32 (3–4.05) | 5.55 (4.57–8.73) | 2.23 | 6.82E-04 |
CTLA4 | 141 | 2.26 (2.07–2.32) | 4.35 (3.33–6.73) | 2.09 | 6.69E-04 |
ICOS | 141 | 2.21 (1.99–2.36) | 3.76 (2.97–8.44) | 1.55 | 6.82E-04 |
IDO1 | 141 | 4.51 (2.75–6.06) | 6.08 (3.11–10.8) | 1.57 | 4.49E-02 |
LAG3 | 141 | 2.14 (1.85–2.31) | 3.91 (2.45–7.17) | 1.77 | 6.69E-04 |
PDCD1 | 141 | 2.48 (1.96–3.04) | 4.76 (4.01–6.59) | 2.28 | 6.43E-04 |
TNFRSF4 | 141 | 2.15 (1.77–2.42) | 3.48 (2.92–3.96) | 1.33 | 6.09E-04 |
TNFRSF9 | 141 | 3.21 (2.17–3.53) | 4.80 (2.69–8.43) | 1.59 | 9.35E-04 |
PVRIG | 141 | 4.65 (4.21–5.43) | 5.87 (3.8–10.27) | 1.22 | 6.41E-03 |
*, Mann-Whitney test