Table 1.
SNP mutations, InDels, and mutation density for the GmFAD2-1A, GmFAD2-1B, GmFAD2-2A, GmFAD2-2B, GmFAD2-2C, GmFAD2-2D, and GmFAD2-2E genes.
Gene ID | Amplicon Size (bp) | Base Changes | Type of Base Changes | InDel | Mutation Density (Kb) | AA Changes | Missense Mutations | Nonsense Mutations | Silent Mutations | ||
---|---|---|---|---|---|---|---|---|---|---|---|
G > A | C > T | Others | |||||||||
Glyma.10G278000 | 1928 | 50 | 13 | 29 | 8 | 0 | 1/155 | 28 | 17 | 0 | 11 |
Glyma.20G111000 | 3403 | 89 | 22 | 29 | 38 | 3 | 1/154 | 25 | 11 | 1 | 13 |
Glyma.19G147300 | 889 | 28 | 13 | 12 | 3 | 1 | 1/128 | 13 | 9 | 1 | 3 |
Glyma.19G147400 | 2711 | 79 | 26 | 39 | 14 | 5 | 1/138 | 39 | 28 | 2 | 9 |
Glyma.03G144500 | 2210 | 87 | 29 | 35 | 23 | 3 | 1/102 | 28 | 15 | 1 | 12 |
Glyma.09G111900 | 1663 | 55 | 18 | 23 | 14 | 2 | 1/121 | 33 | 25 | 2 | 6 |
Glyma.15G195200 | 881 | 53 | 16 | 24 | 13 | 2 | 1/67 | 30 | 25 | 0 | 5 |
Total | 441 | 137 | 191 | 113 | 16 | 196 | 130 | 7 | 59 |