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. 2021 May 17;15(5):e0009419. doi: 10.1371/journal.pntd.0009419

Fig 1. Positioning the Kazakhstan strains within the holarctica subspecies by wgSNP and Maximum Parsimony analysis.

Fig 1

Two thousand and twenty-two SNPs were called among 219 strains comprising 39 strains from Kazakhstan and 180 public data sets belonging to holarctica B.4, B.6 or B.12 (B.16 alias japonica strains were used to root the tree and are not shown). The red star shows the position of the MRCA. Branch lengths of more than ten SNPs are indicated. The branch scale is linear. The total tree size is 2034 (homoplasia 0.6%). The circles representing strains from Kazakhstan are colored according to canSNP assignment as indicated. The geographic origin of strains constituting secondary sublineages is indicated using three-letters country codes.