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. 2021 May 17;15(5):e0009419. doi: 10.1371/journal.pntd.0009419

Fig 2. Focus on the 33 Kazakhstan strains belonging to sublineages B.23 and B.42.

Fig 2

Two hundred and fifty-four SNPs were called by mapping on reference SCHU_S4 (assembly accession GCA_000008985). The Maximum Parsimony tree size is 254 (no homoplasy). The red star indicates the position of the MRCA. The blue star indicates the root of the B.66 polytomy shown in a larger context in S2 Fig. Strains are labelled with year of isolation, host, strain Id and CanSNP assignment. The color code reflect the geographic origin within Kazakhstan (region level). Branch lengths longer than one are indicated. The branch scale is linear.