HCC	Hepatocellular carcinoma
ncRNAs	non-coding RNAs
pre-mRNAs	precursor messenger RNAs
ecircRNAs	exonic circRNA
EIciRNAs	retained-intron or exon-intron circRNAs ciRNAs intronic circRNAs
tricRNAs	tRNA intronic circRNAs
miRNAs	microRNAs
RBPs	RNA-binding proteins
QKI	quaking
MBL	muscleblind proteins
ADAR1	adenosine deaminases acting on RNA 1
SMN	Survival of Motor Neuron
CDR1	cerebellum degeneration-related protein antisense
PABPN1	Poly(A)-binding protein nuclear 1
YAP	Yes-associated protein
PI3K/Akt	phosphoinositide 3-kinase/protein kinase B
U1 snRNP	U1 small nuclear ribonucleoprotein
snRNA	small nuclear RNA
Pol II	RNA polymerase II
CKIs	CDK inhibitor proteins
INK4	Inhibitors of CDK4
Cip/Kip	CDK interacting protein/Kinase inhibitory protein
USP7	ubiquitin-specific protease 7
HDAC2	histone deacetylase 2
RUNX3	Runt-related transcription factor 3
VEGF	vascular endothelial growth factor
MAPK/MEK	mitogen-activated protein kinase/extracellular signal-regulated kinase
HIF-1	hypoxia-induced factor-1
HN1	haematopoietic-and neurologic-expressed sequence 1
MMP9	matrix metalloproteinase 9
Apaf1	apoptosis protease activating factor-1
Bcl-2	B-cell lymphoma-2
PTEN	phosphatase and tensin homolog
EMT	Epithelial-mesenchymal transition
NF-κB	nuclear factor-kappa B
Bak1	BCL2 antagonist/killer 1
HMGB1	high-mobility group box 1 protein
RAGE	receptor for advanced glycation end products
Wnt	wingless type
JAK2/STAT3	Janus kinase 2/signal transducer and activator of transcription 3
PKM2	pyruvate kinase 2
HK2	Hexokinase 2
CSCs	Cancer stem cells
FMRP	fragile X mental retardation protein
PAX5	Paired box 5
DPP4	dipeptidyl peptidase 4
TIM-3	T cell immunoglobulin and mucin domain 3
GRAMD1A	GRAM domain-containing protein 1A
BTG2	B-cell translocation gene 2
ITGB1	β1 integrin
ABCB1	multidrug resistance protein 1
FOXO3	Forkhead Box O3
NOR1	oxidored-nitro domain-containing protein 1
SOX9	sex determining region Y-box 9
YBX1	Y box-binding protein 1
PRP19	Processing Factor 19
CSF-1	colony stimulating factor CSF-1
HDGF	hepatoma-derived growth factor
HIF1AN	hypoxia-inducible factor asparagine hydroxylase
HCC	H precursor messenger RNAs
ecircRNAs	exonic circRNA
EIciRNAs	retained-intron or exon-intron circRNAs ciRNAs intronic circRNAs
tricRNAs	tRNA intronic circRNAs
miRNAs	microRNAs
RBPs	RNA-binding proteins
QKI	quaking
MBL	muscleblind proteins
ADAR1	adenosine deaminases acting on RNA 1
SMN	Survival of Motor Neuron
CDR1	cerebellum degeneration-related protein antisense
PABPN1	Poly(A)-binding protein nuclear 1
YAP	Yes-associated protein
PI3K/Akt	phosphoinositide 3-kinase/protein kinase B
U1 snRNP	U1 small nuclear ribonucleoprotein
snRNA	small nuclear RNA
Pol II	RNA polymerase II
CKIs	CDK inhibitor proteins
INK4	Inhibitors of CDK4
Cip/Kip	CDK interacting protein/Kinase inhibitory protein
USP7	ubiquitin-specific protease 7
HDAC2	histone deacetylase 2
RUNX3	Runt-related transcription factor 3
VEGF	vascular endothelial growth factor
MAPK/MEK	mitogen-activated protein kinase/extracellular signal-regulated kinase
HIF-1	hypoxia-induced factor-1
HN1	haematopoietic-and neurologic-expressed sequence 1
MMP9	matrix metalloproteinase 9
Apaf1	apoptosis protease activating factor-1
Bcl-2	B-cell lymphoma-2
PTEN	phosphatase and tensin homolog
EMT	Epithelial-mesenchymal transition
NF-κB	nuclear factor-kappa B
Bak1	BCL2 antagonist/killer 1
HMGB1	high-mobility group box 1 protein
RAGE	receptor for advanced glycation end products
Wnt	wingless type
JAK2/STAT3	Janus kinase 2/signal transducer and activator of transcription 3
PKM2	pyruvate kinase 2
HK2	Hexokinase 2
CSCs	Cancer stem cells
FMRP	fragile X mental retardation protein
PAX5	Paired box 5
DPP4	dipeptidyl peptidase 4
TIM-3	T cell immunoglobulin and mucin domain 3
GRAMD1A	GRAM domain-containing protein 1A
BTG2	B-cell translocation gene 2
ITGB1	β1 integrin
ABCB1	multidrug resistance protein 1
FOXO3	Forkhead Box O3
NOR1	oxidored-nitro domain-containing protein 1
SOX9	sex determining region Y-box 9
YBX1	Y box-binding protein 1
PRP19	Processing Factor 19
CSF-1	colony stimulating factor CSF-1
HDGF	hepatoma-derived growth factor
HIF1AN	hypoxia-inducible factor asparagine hydroxylase