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Scientific Reports logoLink to Scientific Reports
. 2021 May 27;11:11212. doi: 10.1038/s41598-021-90406-0

Predicting youth diabetes risk using NHANES data and machine learning

Nita Vangeepuram 1,2,3,, Bian Liu 2,3, Po-hsiang Chiu 4, Linhua Wang 4,5, Gaurav Pandey 4
PMCID: PMC8160335  PMID: 34045491

Abstract

Prediabetes and diabetes mellitus (preDM/DM) have become alarmingly prevalent among youth in recent years. However, simple questionnaire-based screening tools to reliably assess diabetes risk are only available for adults, not youth. As a first step in developing such a tool, we used a large-scale dataset from the National Health and Nutritional Examination Survey (NHANES) to examine the performance of a published pediatric clinical screening guideline in identifying youth with preDM/DM based on American Diabetes Association diagnostic biomarkers. We assessed the agreement between the clinical guideline and biomarker criteria using established evaluation measures (sensitivity, specificity, positive/negative predictive value, F-measure for the positive/negative preDM/DM classes, and Kappa). We also compared the performance of the guideline to those of machine learning (ML) based preDM/DM classifiers derived from the NHANES dataset. Approximately 29% of the 2858 youth in our study population had preDM/DM based on biomarker criteria. The clinical guideline had a sensitivity of 43.1% and specificity of 67.6%, positive/negative predictive values of 35.2%/74.5%, positive/negative F-measures of 38.8%/70.9%, and Kappa of 0.1 (95%CI: 0.06–0.14). The performance of the guideline varied across demographic subgroups. Some ML-based classifiers performed comparably to or better than the screening guideline, especially in identifying preDM/DM youth (p = 5.23 × 10−5).We demonstrated that a recommended pediatric clinical screening guideline did not perform well in identifying preDM/DM status among youth. Additional work is needed to develop a simple yet accurate screener for youth diabetes risk, potentially by using advanced ML methods and a wider range of clinical and behavioral health data.

Subject terms: Type 2 diabetes, Disease prevention, Epidemiology, Paediatric research, Risk factors

Introduction

Diabetes mellitus (DM) is a serious chronic condition associated with numerous long-term complications1. Prediabetes (preDM) is a precursor condition in which glucose levels are high, but not yet high enough to diagnose diabetes2. PreDM is reversible with lifestyle modification and weight loss, offering an avenue to avoid the adverse effects of diabetes2,3. Both these conditions have become alarmingly prevalent among youth4,5. According to a large prospective cohort study, an estimated 5,300 youth are diagnosed with type 2 DM annually in the US4, with a higher prevalence among older teens5. The overall prevalence of preDM among US adolescents based on nationally representative data was 17.7%, with higher rates in males (22.0%) than in females (13.2%), in non-Hispanic Blacks (21.0%) and Hispanics (22.9%) than in non-Hispanic Whites (15.1%)6, and in obese youth (25.7%) than in normal weight youth (16.4%)7. Compared to adults, DM in youth is more difficult to treat8 due to a more rapid decline in beta cell function, and an earlier onset of complications9,10. The potential health and economic impact of DM is therefore even greater for youth than adults, given the greater number of years living with the disease and time to develop long-term complications.

The American Diabetes Association (ADA) has published a guideline for identifying preDM and DM among youth based on measurement of biomarkers [plasma glucose level after an overnight fast (FPG), plasma glucose level two hours after an oral glucose load (2hrPG), or hemoglobin A1c (HbA1c)]11. In spite of this guideline, preDM is often underdiagnosed among youth12,13. For example, one study found that only 1% of adolescents with prediabetes reported having been told by a physician that they had the condition13. In addition, despite professional consensus, many youth do not receive recommended annual checkups and preventive services14. Even for those in care, oral glucose tolerance testing is generally not conducted, as it requires fasting and testing over 2–3 h, which is often challenging1517. Thus, many youth with preDM/DM may be unaware of their condition, making it difficult to target the highest risk youth for prevention. A simple non-invasive, questionnaire-based screening tool is, therefore, a likely impactful first-line strategy to identify at-risk individuals before subjecting them to definitive testing and resource-intense prevention programs1820.

Several such risk tools have been developed to detect the risk of prevalent (undiagnosed) and incident preDM and DM in adults2124. For example, the ADA and the Centers for Disease Control and Prevention (CDC) have developed an easy-to-use patient self-assessment screener based on 7 questions to identify adults at risk for preDM and DM25,26. Surprisingly, there exists no similar tool for accurately screening for preDM/DM risk among youth, despite the clinical and public health importance of these conditions. ADA published and the American Academy of Pediatrics (AAP) endorsed the only widely used clinical screening guideline for health care providers to test asymptomatic children and adolescents11. However, this clinical guideline has not been validated using large youth health data sets and ADA diagnostic guidelines11. Furthermore, such guidelines may not perform equally in different age, sex and race/ethnicity subgroups27.

To address these critical knowledge gaps, and as a first step in the development of a youth diabetes risk screening tool, our objective was to examine the performance of the AAP/ADA screening guideline in identifying youth with preDM/DM. Disease determination in our study was based on biomarker (FPG, 2hrPG, and HbA1c) measurements in a large-scale dataset from the National Health and Nutrition Examination Survey (NHANES)28. We also examined how this screening guideline performed in age, sex, and racial/ethnic subgroups. Furthermore, hypothesis-free data-driven machine learning (ML) methods29 have recently helped improve disease diagnosis, prognosis, and treatment efficacy3032. Inspired by these advances, we also investigated if ML methods applied to NHANES data can help improve preDM/DM screening performance33.

Methods

Study population

We utilized publicly available data from NHANES, a large ongoing cross-sectional survey that systematically gathers data from interviews, medical examinations, and laboratory testing for studying a range of health topics28. NHANES oversamples certain subgroups, such as African–Americans, Hispanics, Asians, older adults, and low income populations, to obtain reliable estimates of health status indicators for these groups.

We selected 2970 youth aged 12–19 years from 2005 to 2016 NHANES data for which preDM/DM diagnostic biomarkers were available34. We excluded 112 participants that lacked information on BMI percentile, family history of diabetes, blood pressure measures or total cholesterol, making it impossible to apply the AAP/ADA screening guideline.

PreDM/DM status

PreDM/DM status was based on current ADA biomarker criteria (elevated levels of any of the three biomarkers: FPG ≥ 100 mg/dL, 2hrPG ≥ 140 mg/dL, or HbA1C ≥ 5.7%)11. Since few youth had DM based on biomarker diagnostic criteria (n = 13), we combined youth with preDM and DM into one category. We applied the AAP/ADA screening guideline using operationally defined equivalent variables available in NHANES (Table 1) on both the unweighted and weighted versions of the data. The results shown are on the unweighted data, unless otherwise specified.

Table 1.

Pediatric clinical screening guideline used to define prediabetes/diabetes (preDM/DM) status and their corresponding operationally defined equivalent variables in the National Health and Nutrition Examination Survey (NHANES).e

ADA/AAP preDM/DM risk for children (at-risk if overweight plus one or more additional risk factors) NHANES variables used (at-risk if overweight plus one or more additional risk factors)
Overweight (BMI > 85th percentile for age and sex, weight for height > 85th percentile, or weight > 120% of ideal for height) Aa BMI ≥ 85th percentileb
Additional risk factors: Additional risk factors:
Maternal history of gestational diabetes during the child’s gestation Aa Not available:
Family history of type 2 diabetes in first- or second-degree relative Aa Ever been told by a doctor or other health professional that you have health conditions or a medical or family history that increases your risk for diabetes?
Race/Ethnicity (Native American, African American, Latino, Asian American, Pacific Islander) Aa Non-White race/ethnicity (non-Hispanic Black, Hispanic, other)
Signs of insulin resistance or conditions associated with insulin resistance (hypertension, dyslipidemia, acanthosis nigricans, polycystic ovary syndrome, or small-for-gestational-age birth weight). Ba Hypertensionc: Blood pressure ≥ 90th percentile or ≥ 120/80 mm Hg for children ≥ 13 years; Dyslipidemiad: total cholesterol ≥ 170 mg/dL

aEvidence grades, with grade A and B representing higher and moderate quality evidence, respectively. Grades do not factor into the determination of risk in the current study.

bWe calculated BMI percentiles using the SAS program provided by the CDC for the 2000 CDC growth charts (ages 0 to < 20 years) with overweight/obese defined as > 85th percentile. Available from: https://www.cdc.gov/nccdphp/dnpao/growthcharts/resources/sas.htm.

cWe calculated blood pressure percentiles for children (< 18 years) based on the 2017 Clinical Practice Guidelines from the AAP using the recommended published SAS program. Available from: https://sites.google.com/a/channing.harvard.edu/bernardrosner/pediatric-blood-press/childhood-blood-pressure.

dWe defined dyslipidemia as elevated total cholesterol level (≥ 170 mg/dL) according to AAP guidelines. Available from: https://www.healthychildren.org/English/healthy-living/nutrition/Pages/Cholesterol-Levels-in-Children-and-Adolescents.aspx.

eADA American Diabetes Association; AAP American Academy of Pediatrics; preDM prediabetes; DM diabetes; BMI body mass index; NHANES National Health and Nutrition Examination Survey.

As a sensitivity analysis, we also used a higher threshold level in FPG and HbA1C to define preDM/DM status: FPG > 110 mg/dL, 2hrPG ≥ 140 mg/dL, or HbA1C > 6.0%), as has been suggested by some organizations35.

Machine learning

As alternatives to expert-defined screeners, we explored automated ML methods29 for developing preDM/DM status (yes or no) classifiers directly from the youth NHANES data. We used the same five variables used in the AAP/ADA screening guideline, namely continuous BMI percentiles, family history of diabetes (yes/no), race ethnicity (non-Hispanic White vs. otherwise), hypertension (yes/no), and continuous total cholesterol levels, as features. Ten established algorithms and a five-fold cross-validation setup were used to generate and evaluate preDM/DM classifiers from the values of these features for the youth in our dataset. Details of this classifier generation and evaluation process are provided in Supplemental Information.

Evaluation of screeners

Both the AAP/ADA screening guideline, as well as the ML-based classifiers described above, produce binary classifications, specifically positive ( +) and negative ( −) preDM/DM determinations. Due to the inherent imbalance between these classes (Table 3), we used six appropriate measures36 to evaluate these classifications: sensitivity (recall +), specificity (recall–), positive predictive value (PPV, precision +), negative predictive value (NPV, precision −), and F-measures for the two classes. Table 3 and Supplemental Information provide definitions of these measures, and our detailed reasoning for focusing on them. We used the recommended Friedman and Nemenyi tests37 to assess the statistical significance of the comparisons of the predictive performances of all the ML methods tested, as well as the screening guideline.

Table 3.

Performance measures of pediatric clinical screening guideline when compared against prediabetes/diabetes (preDM/DM) determinations based on biomarker criteria.

AAP/ADA pediatric clinical screening guidelines
preDM/DM based on elevated FPG/2hrPG/HbA1C Yes No Row total
Yes 357 471 828
No 657 1373 2030
Column total 1014 1844 2858
Performance measures of the adult screener/pediatric clinical screening guidelines when compared against preDM/DM based on biomarkers for the positive ( +) and negative class ( −)
Sensitivity (recall +) = Proportion of at-risk based on pediatric clinical screening guidelines that have preDM/DM based on biomarkers 357/828 = 43.1%
Specificity (recall −) = Proportion of not at-risk based on pediatric clinical screening guidelines that do not have preDM/DM based on biomarkers 1272/2030 = 67.6%
Positive Predictive Value (PPV, precision +) = Proportion of youth identified with preDM/DM based on biomarkers among all predicted to be at-risk based on pediatric clinical screening guidelines 357/1014 = 35.2%
Negative Predictive Value (NPV, precision −) = Proportion of youth not identified with preDM/DM based on biomarkers among all predicted not to be at-risk based on pediatric clinical screening guidelines 1373/1844 = 74.5%
F-measure +  = Harmonic (conservative) mean of Precision + and Recall +  = 2*(Precision + * Recall +) / (Precision +  + Recall +) 2*(43.1%*35.2%)/(43.1% + 35.2%) = 38.8%
F-measure −  = Harmonic (conservative) mean of Precision − and Recall −  = 2*(Precision − * Recall −) / (Precision −  + Recall −) 2*(67.6%*74.5%)/(67.6% + 74.5%) = 70.9%

ADA American Diabetes Association; AAP American Academy of Pediatrics; preDM prediabetes; DM diabetes; BMI body mass index; FPG fasting plasma glucose; 2hrPG 2 h plasma glucose; HbA1c hemoglobin A1c. Results based on unweighted data.

We also assessed the six performance measures for the overall data and for sub-datasets stratified by sex (male, female), race/ethnicity (non-Hispanic White, non-Hispanic Black, Hispanic, other), and age groups (12–14 years, 15–17 years, and 18–19 years). We examined the agreement between the AAP/ADA screening guideline and biomarkers in defining preDM/DM using McNemar’s test and reported Kappa coefficient, which has a value ranging from 0 (no consistency) to 1 (complete consistency). We also tested equal Kappa coefficients across subgroups, and used the Breslow-Day test to examine the homogeneity of the odds ratios between preDM/DM status defined by the guideline and by biomarker measurements across subgroups. Analyses were conducted in SAS (v9.4).

Results

Performance of clinical preDM/DM screening guideline

Approximately 29% of the 2858 youth in our study population were classified as having preDM/DM based on ADA biomarker criteria (Table 2). The prevalence was about 35.5% according to the AAP/ADA screening guideline (Table 2). The weighted-NHANES preDM/DM prevalences were quite consistent, i.e., 27.6% and 36.3% according to the ADA biomarker criteria and AAP/ADA screening guideline respectively (Supplementary Table S1).

Table 2.

Characteristics of the study population (n = 2858).

Total: n (%) Normal: n (%) PreDM/DM: n (%)
Total 2858 (100%) 2030 (71.03) 828 (28.97)
Sex
Male 1505 (52.66) 966 (47.59) 539 (65.10)
Female 1353 (47.34) 1064 (52.41) 289 (34.90)
Race/ethnicity
Non-Hispanic White 788 (27.57) 587 (28.92) 201 (24.28)
Non-Hispanic Black 764 (26.73) 552 (27.19) 212 (25.60)
Hispanic 1041 (36.42) 703 (34.63) 338 (40.82)
other 265 (9.27) 188 (9.26) 77 (9.30)
Age group
12–14 years 1071 (37.47) 723 (35.62) 348 (42.03)
15–17 years 1088 (38.07) 813 (40.05) 275 (33.21)
18–19 years 699 (24.46) 494 (24.33) 205 (24.76)
BMI percentile categories
BMI < 85th 1728 (60.46) 1290 (63.55) 438 (52.90)
85th ≤ BMI < 95th 488 (17.07) 364 (17.93) 127 (14.98)
95th ≤ BMI < 99th 452 (15.82) 283 (13.94) 169 (20.41)
BMI ≥ 99th 190 (6.65) 93 (4.58) 97 (11.71)
At risk for preDM/DM based on AAP/ADA pediatric clinical screening guidelines
No 1844 (64.52) 1373 (67.64) 471 (56.88)
Yes 1014 (35.48) 657 (32.36) 357 (43.21)
Mean (SD; Median) Mean (SD; Median) Mean (SD; Median)
Age (years) 15.5 (2.3; 16.0) 15.5 (2.2; 16.0) 15.3 (2.3; 15)
Fasting plasma glucose (FPG, mg/dL) 94.3 (8.1; 94.0) 91.3 (5.4; 92) 101.5 (9.1; 102)
Two hour plasma glucose (2hrPG, mg/dL) 98.2 (23.5; 96.0) 92.7 (18.3; 92) 111.6 (28.8; 107)
Hemoglobin A1c (HbA1c, %) 5.2 (0.3; 5.2) 5.1 (0.3; 5.2) 5.4 (0.4; 5.4)
Cholesterol, total (mg/dL) 159.3 (30.3; 156.0) 158.1 (30.2; 155) 162.4 (30.1; 159)
BMI-for-age percentile 67.9 (28.9; 76.6) 66.3 (28.8; 74.2) 71.5 (28.9; 81.8)

ADA American Diabetes Association; AAP American Academy of Pediatrics; preDM prediabetes; DM diabetes; BMI body mass index. SD standard deviation. Results based on unweighted data.

As shown in Table 3, the guideline correctly identified 43.1% of the youth with preDM/DM based on biomarkers (sensitivity), the PPV (precision +) was 35.2%, and the preDM/DM F-measure was 38.8%. We found poor agreement between preDM/DM determinations based on biomarkers and those based on the AAP/ADA screening guideline (Kappa coefficient 0.1 (95%CI: 0.06–0.14), p < 0.0001). The Kappa coefficients did not differ by sex, age, or race/ethnicity (p > 0.05), indicating that the guideline did not perform well in any of the subgroups. The agreement between preDM/DM determinations based on biomarkers and those based on the screening guideline differed between males and females (Breslow-Day test p = 0.02), and across the three age groups (p = 0.046). It did not differ across the four racial/ethnic groups (p = 0.42).

The predictive performance measures of the screening guideline also varied across the various subgroups (Fig. 1). The sensitivity (recall +) was higher among females than males (52.2% vs 38.2%), while the PPV (precision +) was lower among females (29.4% vs 41.1%). The guideline performed better for Hispanics and non-Hispanic Blacks than for non-Hispanic Whites and other racial/ethnic groups in terms of sensitivity (51.8% and 51.9% vs 23.4% and 32.5% respectively), while the PPV was similar (28.8%–37.6%) across the four racial/ethnic groups. Finally, the guideline performed the worst for those aged 12–14 years (sensitivity = 39.9%) and the best for those aged 18–19 years (sensitivity = 47.8%, PPV = 30.2%, and F-measure = 43.7%).

Figure 1.

Figure 1

Variations in the performance of the American Diabetes Association pediatric screening guidelines in identifying youth with prediabetes/diabetes (preDM/DM) based on biomarker measurements across subgroups stratified by age group (12–14, 15–17, and 18–19), race/ethnicity (Hispanic, non-Hispanic Black, non-Hispanic White, other), and sex (female, male). Red lines denote the value of the corresponding evaluation measure obtained from the full study population (youth ages 12–19, National Health and Nutrition Examination Survey data, 2005–2016). preDM prediabetes; DM diabetes; F female; M male; Hisp Hispanic; NHB non-Hispanic Black; NHW non-Hispanic White; PPV positive predictive value; NPV negative predictive value. Results based on unweighted data.

Results from the sensitivity analysis using higher biomarker thresholds (FPG > 110 mg/dL, 2hrPG ≥ 140 mg/dL, or HbA1C > 6.0%) showed similar performance measures: sensitivity = 56.2%, specificity = 66.0%, PPV = 10.3%, NPV = 95.6%, F-measure = 17.3% and 78.1% for those with and without preDM/DM, respectively. Similar to results on unweighted NHANES data, we found that the AAP/ADA screening guideline performed unsatisfactorily in identifying youth with preDM/DM on weighted NHANES data as well (Supplementary Table S2): sensitivity = 36.34%, specificity = 74.05%, PPV = 34.79%, NPV = 75.33%, and F-measures = 35.55% and 74.68% for those with and without preDM/DM, respectively. Similar performance variations across sex, race/ethnicity and age subgroups were also found on the weighted NHANES data (Supplementary Figure S2).

Performance of ML-based preDM/DM classifiers

Figure 2 shows the five-fold cross-validation38-derived results of classifying preDM/DM status using ML methods, variables used in the screening guideline, and class labels (preDM/DM or not) defined using biomarker criteria. Across almost all the methods and evaluation measures, it was comparatively easier to produce more accurate predictions for the bigger non-preDM/DM class than the smaller preDM/DM one. Even so, the overall performance of the ML methods varied in a manner consistent with that of the screening guideline across the evaluation measures and classes. Furthermore, in each case, at least one ML method performed better than the screening guideline, especially for the harder to predict preDM/DM class. In particular, the naïve Bayes-based classifier performed equivalently or better than the guideline in terms of all the measures for this class (Friedman-Nemenyi test p = 9.216 × 10−5, 0.252 and 5.228 × 10−5 for PPV, sensitivity and F-measure respectively). This algorithm assumes conditional independence between the features, given the class labels. It then uses Bayes’ theorem to generate a simple classifier that calculates the posterior probability for a class label based on the values of the features for a given patient. The classifier based on this algorithm also performed better than or equivalently to the guideline for the non-preDM/DM class (p = 8.5 × 10−10, 0.225 and 0.005 for NPV, specificity and F-measure respectively). Several other methods, such as Logistic (Regression), LogitBoost, PART and J48 (decision tree), also performed statistically equivalently or better than the screening guideline. Overall, these results show that even with very few features (only five here), data-driven ML-based methods can help improve upon the performance of the AAP/ADA preDM/DM screening guideline.

Figure 2.

Figure 2

Performance of machine learning algorithms in classifying individuals into prediabetes/diabetes (preDM/DM) and non-preDM/DM classes, evaluated in terms of predictive value, sensitivity/specificity and F-measures for both classes. The variables used in this classification were the same as those used in the American Diabetes Association pediatric screening guidelines, whose performance in terms of each measure is shown by a horizontal red line in the corresponding subplot. preDM prediabetes; DM diabetes; PPV positive predictive value; NPV negative predictive value.

Discussion

The recently increasing prevalence of preDM/DM among youth, even among those with normal weight7, and the underdiagnosis of these conditions despite serious long-term sequelae, point to a pressing need for the development of simple accurate screening tools for identifying at-risk youth. Towards that end, we conducted the first evaluation of a current pediatric clinical screening guideline recommended by the AAP and ADA on NHANES data, using preDM/DM status determined based on biomarker criteria (elevated FPG/2hrPG/HbA1C) for comparison. Despite the fact that the pediatric clinical screening guideline is meant for health care providers to identify youth at risk for diabetes, the sensitivity of the guideline in identifying NHANES youth with preDM/DM based on biomarkers was below 50%. The agreement between risk based on the clinical screening guideline and presence of preDM/DM based on biomarker criteria was similarly poor across demographic subgroups based on age, sex and race/ethnicity. On the other hand, we found that the prevalence of preDM/DM varied across these subgroups, and the association between preDM/DM status defined by the guideline and based on biomarkers differed between males and females, and potentially by age groups. Another study also reported variations in the performance of diabetes risk scores by sex and race/ethnicity among adult populations in NHANES27. Taken together, these results suggest the need for a better screener than the current one, and a screener that can perform well for subgroup populations.

Data-driven ML-based methods29 yielded improvements over the screening guideline in identifying youth with preDM/DM, despite using only the five variables (BMI, family history of diabetes, race/ethnicity, hypertension, and cholesterol levels) the guideline is based on. Combining many more relevant features from NHANES or other large data sets with rich clinical and behavioral health data, as well as powerful ML approaches like feature selection39 and deep learning40, is likely to substantially enhance our ability to develop a data-driven, relatively simple, and accurate screener for youth at risk for preDM/DM.

Of note, about half of the youth with preDM/DM in this study were of normal weight. Indeed, a recent study, also based on an examination of NHANES data, found that 16.4% of normal weight youth had preDM7. Another study found a relative annual increase in the incidence of type 2 diabetes, despite the fact that there was no significant increase in the prevalence of obesity among US youth in the same time period41. Factors other than weight status are known to increase risk of diabetes, including minority race/ethnicity and family history of diabetes7,4143. Indeed, due to their relevance, these factors are included in the pediatric screening guideline that we evaluated in our study. There are likely other factors that impact diabetes risk that are yet to be discovered. Thus, although all normal weight youth may not be at risk of developing DM, there is still value in identifying all youth with preDM, even those that aren’t obese, because they have been shown to have increased cardiovascular risk44. This is exactly the perspective we adopted in our study.

Despite its promising findings, our study has some limitations. PreDM/DM status was determined based on one-time measurements of biomarkers due to the data availability in NHANES, whereas the ADA recommends repeated measurements11. Specifically, preDM diagnosis based on a single assessment may not capture youth truly at risk for progression to DM, because preDM in adolescence is sometimes transient and related to physiologic pubertal insulin resistance10,11. Furthermore, NHANES data, and thus, our evaluation, did not differentiate type 1 from type 2 diabetes. We do not expect this to substantially affect our results, since the prevalence of type 1 diabetes among youth is relatively low as compared to the combined prevalence of preDM and type 2 DM5,6. Another limitation is that we were not able to exactly apply the AAP/ADA pediatric clinical screening guideline because of missing information (history of maternal gestational diabetes during the child’s gestation, presence of acanthosis nigricans, diagnosis of polycystic ovary syndrome, and history of small-for-gestational-age birthweight), or information available in a different format (family history of diabetes). Finally, we only evaluated the ML-based methods on unweighted NHANES data, since there aren’t straightforward ways to apply and evaluate these methods on weighted data.

Despite these limitations, our study also has several strengths. To our knowledge, this is the first examination of the performance of a recommended pediatric clinical screening guideline for identifying preDM/DM status, determined using biomarker criteria, among youth. Our demonstration that the guideline did not perform well for this task points to the need for additional work to develop a simple yet accurate screener for youth diabetes risk. Studies focused on assessing youth preDM/DM risk to date have relied on relatively small sample sizes from localized clinical settings, and have sometimes included invasive blood tests that may not be the best initial strategy to assess risk45,46. In contrast, NHANES includes a large sample of individuals from across the United States, including well-represented age, sex, and racial/ethnic subgroups, as well as detailed biomarker, clinical, and behavioral health data. While NHANES data have been used to develop diabetes risk screeners for adults25,47,48, and to examine prevalence of preDM/DM among youth6,49, no studies before ours have used these data to develop and evaluate youth diabetes risk screeners. In particular, our investigation of machine learning methods applied to these data demonstrates the promise of automated data-driven methods for developing such screeners. Future work includes the use of more advanced ML methods applied to a wider range of clinical and behavioral health data available in NHANES to build better predictive tools for assessing preDM/DM risk. Such tools can be used by youth or their caretakers, as well as in clinical and community settings, to identify at-risk youth who can benefit from more intensive diabetes prevention programs.

Supplementary Information

Acknowledgements

The study was enabled in part by computational resources provided by Scientific Computing at the Icahn School of Medicine at Mount Sinai.

Author contributions

N.V., B.L., and G.P. conceived the study and wrote the manuscript. N.V. provided clinical expertise and supervised the study. B.L. prepared the relevant NHANES data and carried out the performance analyses of the screeners. L.W. and P.C. carried out the machine learning analyses under G.P.’s supervision. All the authors reviewed and approved the manuscript.

Funding

This work was supported by a National Institutes of Health grant [R01GM114434] and an IBM Faculty award to author G.P. and by a Cigna Foundation Grant [10005177] awarded to author N.V. This work was also supported by NIH grant P30 ES023515 and by a National Cancer Institute grant [1R21CA235153] award to author B.L.

Competing interests

The authors declare no competing interests.

Footnotes

Publisher's note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

The online version contains supplementary material available at 10.1038/s41598-021-90406-0.

References

  • 1.Lotfy M, Adeghate J, Kalasz H, Singh J, Adeghate E. Chronic Complications of diabetes mellitus: A mini review. Curr. Diabetes Rev. 2017;13(1):3–10. doi: 10.2174/1573399812666151016101622. [DOI] [PubMed] [Google Scholar]
  • 2.Perreault L, Faerch K. Approaching pre-diabetes. J. Diabetes Complicat. 2014;28(2):226–233. doi: 10.1016/j.jdiacomp.2013.10.008. [DOI] [PubMed] [Google Scholar]
  • 3.Love-Osborne KA, Sheeder JL, Nadeau KJ, Zeitler P. Longitudinal follow up of dysglycemia in overweight and obese pediatric patients. Pediatr. Diabetes. 2018;19(2):199–204. doi: 10.1111/pedi.12570. [DOI] [PubMed] [Google Scholar]
  • 4.Mayer-Davis EJ, Lawrence JM, Dabelea D, Divers J, Isom S, Dolan L, et al. Incidence trends of type 1 and type 2 diabetes among youths, 2002–2012. N. Engl. J. Med. 2017;376(15):1419–1429. doi: 10.1056/NEJMoa1610187. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Dabelea D, Mayer-Davis EJ, Saydah S, Imperatore G, Linder B, Divers J, et al. Prevalence of type 1 and type 2 diabetes among children and adolescents from 2001 to 2009. JAMA. 2014;311(17):1778–1786. doi: 10.1001/jama.2014.3201. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 6.Menke A, Casagrande S, Cowie CC. Prevalence of diabetes in adolescents aged 12 to 19 years in the United States, 2005–2014. JAMA. 2016;316(3):344–345. doi: 10.1001/jama.2016.8544. [DOI] [PubMed] [Google Scholar]
  • 7.Andes LJ, Cheng YJ, Rolka DB, Gregg EW, Imperatore G. Prevalence of prediabetes among adolescents and young adults in the United States, 2005–2016. JAMA Pediatr. 2019:e194498. [DOI] [PMC free article] [PubMed]
  • 8.Group TS. Zeitler P, Hirst K, Pyle L, Linder B, Copeland K, et al. A clinical trial to maintain glycemic control in youth with type 2 diabetes. N. Engl. J. Med. 2012;366(24):2247–2256. doi: 10.1056/NEJMoa1109333. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Dart AB, Martens PJ, Rigatto C, Brownell MD, Dean HJ, Sellers EA. Earlier onset of complications in youth with type 2 diabetes. Diabetes Care. 2014;37(2):436–443. doi: 10.2337/dc13-0954. [DOI] [PubMed] [Google Scholar]
  • 10.Nadeau KJ, Anderson BJ, Berg EG, Chiang JL, Chou H, Copeland KC, et al. Youth-onset type 2 diabetes consensus report: Current status, challenges, and priorities. Diabetes Care. 2016;39(9):1635–1642. doi: 10.2337/dc16-1066. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 11.Arslanian S, Bacha F, Grey M, Marcus MD, White NH, Zeitler P. Evaluation and management of youth-onset type 2 diabetes: A position statement by the American Diabetes Association. Diabetes Care. 2018;41(12):2648–2668. doi: 10.2337/dci18-0052. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 12.Bloomgarden ZT. Type 2 diabetes in the young: the evolving epidemic. Diabetes Care. 2004;27(4):998–1010. doi: 10.2337/diacare.27.4.998. [DOI] [PubMed] [Google Scholar]
  • 13.Lee AM, Fermin CR, Filipp SL, Gurka MJ, DeBoer MD. Examining trends in prediabetes and its relationship with the metabolic syndrome in US adolescents, 1999–2014. Acta Diabetol. 2017;54(4):373–381. doi: 10.1007/s00592-016-0958-6. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Black LI, Nugent CN, Vahratian A. Access and utilization of selected preventive health services among adolescents aged 10–17. NCHS Data Brief. 2016;246:1–8. [PubMed] [Google Scholar]
  • 15.Rhodes ET, Finkelstein JA, Marshall R, Allen C, Gillman MW, Ludwig DS. Screening for type 2 diabetes mellitus in children and adolescents: attitudes, barriers, and practices among pediatric clinicians. Ambul. Pediatr. 2006;6(2):110–114. doi: 10.1016/j.ambp.2005.10.005. [DOI] [PubMed] [Google Scholar]
  • 16.Anand SG, Mehta SD, Adams WG. Diabetes mellitus screening in pediatric primary care. Pediatrics. 2006;118(5):1888–1895. doi: 10.1542/peds.2006-0121. [DOI] [PubMed] [Google Scholar]
  • 17.Lee JM, Eason A, Nelson C, Kazzi NG, Cowan AE, Tarini BA. Screening practices for identifying type 2 diabetes in adolescents. J. Adolesc. Health. 2014;54(2):139–143. doi: 10.1016/j.jadohealth.2013.07.003. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 18.Brackney DE, Cutshall M. Prevention of type 2 diabetes among youth: a systematic review, implications for the school nurse. J. Sch. Nurs. 2015;31(1):6–21. doi: 10.1177/1059840514535445. [DOI] [PubMed] [Google Scholar]
  • 19.McCurley JL, Crawford MA, Gallo LC. Prevention of type 2 diabetes in US hispanic youth: A systematic review of lifestyle interventions. Am. J. Prev. Med. 2017;53(4):519–532. doi: 10.1016/j.amepre.2017.05.020. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Knowler WC, Fowler SE, Hamman RF, Christophi CA, Hoffman HJ, Brenneman AT, et al. 10-year follow-up of diabetes incidence and weight loss in the Diabetes Prevention Program Outcomes Study. Lancet. 2009;374(9702):1677–1686. doi: 10.1016/S0140-6736(09)61457-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Brown N, Critchley J, Bogowicz P, Mayige M, Unwin N. Risk scores based on self-reported or available clinical data to detect undiagnosed type 2 diabetes: A systematic review. Diabetes Res. Clin. Pract. 2012;98(3):369–385. doi: 10.1016/j.diabres.2012.09.005. [DOI] [PubMed] [Google Scholar]
  • 22.Noble D, Mathur R, Dent T, Meads C, Greenhalgh T. Risk models and scores for type 2 diabetes: Systematic review. BMJ. 2011;343:d7163. doi: 10.1136/bmj.d7163. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Barber SR, Davies MJ, Khunti K, Gray LJ. Risk assessment tools for detecting those with pre-diabetes: A systematic review. Diabetes Res. Clin. Pract. 2014;105(1):1–13. doi: 10.1016/j.diabres.2014.03.007. [DOI] [PubMed] [Google Scholar]
  • 24.Thoopputra T, Newby D, Schneider J, Li SC. Survey of diabetes risk assessment tools: concepts, structure and performance. Diabetes Metab. Res. Rev. 2012;28(6):485–498. doi: 10.1002/dmrr.2296. [DOI] [PubMed] [Google Scholar]
  • 25.Bang H, Edwards AM, Bomback AS, Ballantyne CM, Brillon D, Callahan MA, et al. Development and validation of a patient self-assessment score for diabetes risk. Ann. Intern. Med. 2009;151(11):775–783. doi: 10.7326/0003-4819-151-11-200912010-00005. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 26.Prediabetes Risk Test: American Diabetes Association and Centers for Disease Control and Prevention; [Available from: https://www.cdc.gov/diabetes/prevention/pdf/Prediabetes-Risk-Test-Final.pdf.
  • 27.Zhang L, Zhang Z, Zhang Y, Hu G, Chen L. Evaluation of Finnish Diabetes Risk Score in screening undiagnosed diabetes and prediabetes among U.S. adults by gender and race: NHANES 1999–2010. PLoS ONE. 2014;9(5):e97865. doi: 10.1371/journal.pone.0097865. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 28.Zipf G, Chiappa M, Porter KS, Ostchega Y, Lewis BG, Dostal J. National health and nutrition examination survey: plan and operations, 1999–2010. Vital Health Stat 1. 2013;56:1–37. [PubMed] [Google Scholar]
  • 29.Alpaydin E. Introduction to Machine Learning. MIT Press; 2014. [Google Scholar]
  • 30.Deo RC. Machine learning in medicine. Circulation. 2015;132(20):1920–1930. doi: 10.1161/CIRCULATIONAHA.115.001593. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 31.Pandey G, Pandey OP, Rogers AJ, Ahsen ME, Hoffman GE, Raby BA, et al. A nasal brush-based classifier of asthma identified by machine learning analysis of nasal RNA sequence data. Sci. Rep. 2018;8(1):8826. doi: 10.1038/s41598-018-27189-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 32.Varghese B, Chen F, Hwang D, Palmer SL, De Castro Abreu AL, Ukimura O, et al. Objective risk stratification of prostate cancer using machine learning and radiomics applied to multiparametric magnetic resonance images. Sci. Rep. 2019;9(1):1570. doi: 10.1038/s41598-018-38381-x. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 33.Cleophas TJ, Zwinderman AH. Machine Learning in Medicine—a Complete Overview. Springer; 2015. [Google Scholar]
  • 34.National Center for Health Statistics. NHANES Questionnaires, Datasets, and Related Documentation 2018 [Available from: https://wwwn.cdc.gov/nchs/nhanes/default.aspx.
  • 35.Classification and Diagnosis of Diabetes Standards of Medical Care in Diabetes-2019. Diabetes Care. 2019;42(Suppl 1):S13–s28. doi: 10.2337/dc19-S002. [DOI] [PubMed] [Google Scholar]
  • 36.Lever J, Krzywinski M, Altman N. Points of significance: Classification evaluation. Nat Methods. 2016;13(8):603–604. doi: 10.1038/nmeth.3945. [DOI] [Google Scholar]
  • 37.Demsar J. Statistical Comparisons of classifiers over multiple data sets. J. Mach. Learn Res. 2006;7:1–30. [Google Scholar]
  • 38.Arlot S, Celisse A. A survey of cross-validation procedures for model selection. Stat. Surv. 2010;4:40–79. doi: 10.1214/09-SS054. [DOI] [Google Scholar]
  • 39.Saeys Y, Inza I, Larranaga P. A review of feature selection techniques in bioinformatics. Bioinformatics (Oxford, England). 2007;23(19):2507–2517. doi: 10.1093/bioinformatics/btm344. [DOI] [PubMed] [Google Scholar]
  • 40.Ching T, Himmelstein DS, Beaulieu-Jones BK, Kalinin AA, Do BT, Way GP, et al. Opportunities and obstacles for deep learning in biology and medicine. J. R. Soc. Interface. 2018;15(141):20170387. doi: 10.1098/rsif.2017.0387. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 41.Mayer-Davis EJ, Dabelea D, Lawrence JM. Incidence trends of type 1 and type 2 diabetes among youths, 2002–2012. N. Engl. J. Med. 2017;377(3):301. doi: 10.1056/NEJMc1706291. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 42.Zamora-Kapoor A, Fyfe-Johnson A, Omidpanah A, Buchwald D, Sinclair K. Risk factors for pre-diabetes and diabetes in adolescence and their variability by race and ethnicity. Prev. Med. 2018;115:47–52. doi: 10.1016/j.ypmed.2018.08.015. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 43.Zhang Y, Luk AOY, Chow E, Ko GTC, Chan MHM, Ng M, et al. High risk of conversion to diabetes in first-degree relatives of individuals with young-onset type 2 diabetes: A 12-year follow-up analysis. Diabetes Med. 2017;34(12):1701–1709. doi: 10.1111/dme.13516. [DOI] [PubMed] [Google Scholar]
  • 44.Casagrande, S. S., Menke, A., Linder, B., Osganian, S. K. & Cowie, C. C. Cardiovascular risk factors in adolescents with prediabetes. Diabet Med. (2018). [DOI] [PMC free article] [PubMed]
  • 45.Lee JM, Gebremariam A, Woolford SJ, Tarini BA, Valerio MA, Bashir S, et al. A risk score for identifying overweight adolescents with dysglycemia in primary care settings. J. Pediatr. Endocrinol. Metab. 2013;26(5–6):477–488. doi: 10.1515/jpem-2012-0259. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 46.Santoro N, Amato A, Grandone A, Brienza C, Savarese P, Tartaglione N, et al. Predicting metabolic syndrome in obese children and adolescents: look, measure and ask. Obes. Facts. 2013;6(1):48–56. doi: 10.1159/000348625. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 47.Heikes KE, Eddy DM, Arondekar B, Schlessinger L. Diabetes risk calculator: A simple tool for detecting undiagnosed diabetes and pre-diabetes. Diabetes Care. 2008;31(5):1040–1045. doi: 10.2337/dc07-1150. [DOI] [PubMed] [Google Scholar]
  • 48.Herman WH, Smith PJ, Thompson TJ, Engelgau MM, Aubert RE. A new and simple questionnaire to identify people at increased risk for undiagnosed diabetes. Diabetes Care. 1995;18(3):382–387. doi: 10.2337/diacare.18.3.382. [DOI] [PubMed] [Google Scholar]
  • 49.May AL, Kuklina EV, Yoon PW. Prevalence of cardiovascular disease risk factors among US adolescents, 1999–2008. Pediatrics. 2012;129(6):1035–1041. doi: 10.1542/peds.2011-1082. [DOI] [PubMed] [Google Scholar]

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