TABLE 2.
Assay ID | miRNAa | Sequence | Relevance to aSAH and cerebral vasculature |
000377 | hsa-let-7a-5pb | UGAGGUAGUAGGUUGUAUAGUU | Inflammatory/immune response |
002619 | hsa-let-7b-5pb | UGAGGUAGUAGGUUGUGUGGUU | Angiogenesis/inflammatory and immune response |
000379 | hsa-let-7c-5pb | UGAGGUAGUAGGUUGUAUGGUU | Inflammatory/immune response |
000439 | hsa-miR-103a-3pb | AGCAGCAUUGUACAGGGCUAUGA | Cell migration/wound healing |
000443 | hsa-miR-107b | AGCAGCAUUGUACAGGGCUAUCA | Inflammatory response/cell migration/wound healing |
000449 | hsa-miR-125b-5pb | UCCCUGAGACCCUAACUUGUGA | Cell proliferation/neuronal Integrity |
002884 | hsa-miR-1274bc | UCCCUGUUCGGGCGCCA | Potential normalizer (CSF) |
002861 | hsa-miR-1298-5pb | UUCAUUCGGCUGUCCAGAUGUA | Neural regeneration |
000457 | hsa-miR-132-3pb | UAACAGUCUACAGCCAUGGUCG | Vascular angiogenesis |
000464 | hsa-miR-142-3pb | UGUAGUGUUUCCUACUUUAUGGA | Inflammatory and immune response |
002248 | hsa-miR-142-5p | CAUAAAGUAGAAAGCACUACU | Inflammatory and immune response |
002676 | hsa-miR-144-3pb | UACAGUAUAGAUGAUGUACU | Proliferation/apoptosis/oxidative stress |
000468 | hsa-miR-146a-5pb | UGAGAACUGAAUUCCAUGGGUU | Inflammatory and immune response |
001097 | hsa-miR-146b-5p | UGAGAACUGAAUUCCAUAGGCU | Inflammatory and immune response |
000473 | hsa-miR-150-5p | UCUCCCAACCCUUGUACCAGUG | Inflammatory and immune response/BBB permeability |
001191 | hsa-miR-153-3pb | UUGCAUAGUCACAAAAGUGAUC | Neurogenesis |
002623 | hsa-miR-155-5pb | UUAAUGCUAAUCGUGAUAGGGGU | Inflammatory and immune response/arteriogenesis |
000389 | hsa-miR-15a-5pb | UAGCAGCACAUAAUGGUUUGUG | Vascular angiogenesis |
000390 | hsa-miR-15b-5pb | UAGCAGCACAUCAUGGUUUACA | Apoptosis/inflammatory response |
000391 | hsa-miR-16-5pb | UAGCAGCACGUAAAUAUUGGCG | Vascular angiogenesis |
002308 | hsa-miR-17-5pb | CAAAGUGCUUACAGUGCAGGUAG | Neovascularization/apoptosis/proliferation |
000480 | hsa-miR-181a-5pb | AACAUUCAACGCUGUCGGUGAGU | Apoptosis/inflammatory response |
000482 | hsa-miR-181c-5pb | AACAUUCAACCUGUCGGUGAGU | Apoptosis/inflammatory response |
000494 | hsa-miR-195-5pb | UAGCAGCACAGAAAUAUUGGC | Homeostasis of vessel smooth muscle cells |
000396 | hsa-miR-19b-3pb | UGUGCAAAUCCAUGCAAAACUGA | Neovascularization/apoptosis/proliferation |
000508 | hsa-miR-204-5pb,c | UUCCCUUUGUCAUCCUAUGCCU | Apoptosis/proliferation |
000580 | hsa-miR-20a-5pb | UAAAGUGCUUAUAGUGCAGGUAG | Neovascularization/apoptosis/proliferation |
000397 | hsa-miR-21-5pb | UAGCUUAUCAGACUGAUGUUGA | Apoptosis/inflammatory |
000524 | hsa-miR-221-3pb | AGCUACAUUGUCUGCUGGGUUUC | Apoptosis/inflammatory |
002295 | hsa-miR-223-3pb | UGUCAGUUUGUCAAAUACCCCA | Inflammatory and immune response |
000399 | hsa-miR-23a-3p | AUCACAUUGCCAGGGAUUUCC | Mitochondrial function/apoptosis |
000400 | hsa-miR-23b-3pb | AUCACAUUGCCAGGGAUUACC | Mitochondrial function/apoptosis |
000402 | hsa-miR-24-3pb | UGGCUCAGUUCAGCAGGAACAG | Apoptosis/proliferation |
000408 | hsa-miR-27a-3pb | UUCACAGUGGCUAAGUUCCGC | Autophagy/apoptosis |
000409 | hsa-miR-27b-3pb | UUCACAGUGGCUAAGUUCUGC | Autophagy/apoptosis |
002112 | hsa-miR-29a-3pb | UAGCACCAUCUGAAAUCGGUUA | Apoptosis/proliferation/immune response |
000413 | hsa-miR-29b-3pb | UAGCACCAUUUGAAAUCAGUGUU | Apoptosis/proliferation/immune response |
000587 | hsa-miR-29c-3pb | UAGCACCAUUUGAAAUCGGUUA | Apoptosis/proliferation/immune response |
000426 | hsa-miR-34a-5pb | UGGCAGUGUCUUAGCUGGUUGU | Autophagy/inflammatory response |
002102 | hsa-miR-34b-3pb | CAAUCACUAACUCCACUGCCAU | Autophagy/inflammatory response |
001043 | hsa-miR-497-5p | CAGCAGCACACUGUGGUUUGU | Apoptosis/inflammatory response |
002268 | hsa-miR-874-3p | CUGCCCUGGCCCGAGGGACCGA | Apoptosis/inflammatory response |
000583 | hsa-miR-9-5pb | UCUUUGGUUAUCUAGCUGUAUGA | Neurogenesis and differentiation |
000430 | hsa-miR-92a-3pb | UAUUGCACUUGUCCCGGCCUG | Neovascularization/apoptosis/proliferation |
001182 | hsa-miR-124-3pb | UAAGGCACGCGGUGAAUGCC | Neurogenesis, differentiation, and inflammatory response |
002571 | mmu-miR-155-5pd | UUAAUGCUAAUUGUGAUAGGGGU | |
001141 | hsa-miR-451ab | AAACCGUUACCAUUACUGAGUU | Apoptosis/inflammatory response/RBC enriched |
aAll selected miRNAs are known to be associated with CNS injuries or cerebral vasculature damage. bmiRNA has been implicated in biomarker studies related to CNS (TBI or SCI) or stroke. cmiRNA is a potential normalizer for CSF. dmmu-miR-155-5p was included for a separate unrelated rodent study.