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. 2021 May 19;2(2):100549. doi: 10.1016/j.xpro.2021.100549
REAGENT or RESOURCE SOURCE IDENTIFIER
Flow cytometry antibodies/reagents

Anti-human CD3 BioLegend Cat# 317308 (PE), 317306 (FITC), 317342; RRID AB_571913, AB_571907, AB_2563410
Anti-human CD4 BioLegend Cat# 317408; RRID AB_571951
Anti-human CD8 BioLegend Cat# 344722 (APC), 344704 (FITC), 344714; RRID AB_2075388, AB_1877178, AB_2044006
Anti-human CD69 BioLegend Cat# 310914; RRID AB_314849
Anti-human CD25 BioLegend Cat# 302606; RRID AB_314276
Anti-human HLA-DR BioLegend Cat# 307610; RRID AB_314688
Anti-human/mouse Granzyme B BioLegend Cat# 515403; RRID AB_2114575
Anti-human TNF-alpha BioLegend Cat# 502908; RRID AB_315260
Anti-human IFN-gamma BioLegend Cat# 506510; RRID AB_2623781
FITC Mouse IgG1, κ Isotype Ctrl Antibody BioLegend Cat# 400108
PE Mouse IgG1, κ Isotype Ctrl Antibody BioLegend Cat# 400112
APC Mouse IgG1, κ Isotype Ctrl Antibody BioLegend Cat# 400120
True-Nuclear Transcription Factor Buffer Set BioLegend Cat# 424401
SYTOX Blue Viability Dye Thermo Fisher Scientific Cat# S34857
LIVE/DEAD Fixable Aqua Dead Cell Dye Thermo Fisher Scientific Cat# L-34966

Biological samples

Human blood from healthy donors UHN-REB (No. 11-0343-CE) N/A

Chemicals, peptides, and recombinant proteins

Lymphoprep STEMCELL Technologies Cat# 07851
RPMI 1640 Wisent Cat# 350-000-CL
HBSS Wisent Cat# 311-513-CL
Human AB Serum Sigma Cat# H4522
Fetal Bovine Albumin Thermo Fisher Scientific Cat# 12483020
Bovine Serum Albumin BioShop Cat# ALB001
Human IL-2 Miltenyi Biotec Cat# 130-097-743
HEPES (1 M) Thermo Fisher Scientific Cat# 15630-080
Penicillin-Streptomycin-Glutamine (100×) Thermo Fisher Scientific Cat# 10378-016
Ammonium chloride (NH4Cl) Sigma Cat# 213330
Potassium bicarbonate (KHCO3) Sigma Cat# 237205
EDTA (0.5 M) Thermo Fisher Scientific Cat# 15575-020
Phosphate-buffered saline (PBS) Thermo Fisher Scientific Cat# 10010049
HBSS Thermo Fisher Scientific Cat# 14025092
5-Aza-2-deoxycytidine Sigma Cat# A3656-5MG

Critical commercial assays

CD8+ T cells negative selection kit Miltenyi Biotec Cat# 130-096-495
CD8 MicroBeads Miltenyi Biotec Cat# 130-045-201
Dynabeads Human T-Activator CD3/CD28 Thermo Fisher Scientific Cat# 11131D
Cell Stimulation plus Protein secretion inhibitor Cocktail (Cocktail 1 in this protocol) Thermo Fisher Scientific Cat# 00-4975-03
Protein secretion inhibitor Cocktail (Cocktail 2 in this protocol) Thermo Fisher Scientific Cat# 00-4980-93
QuadroMACS™ Starting Kit (LS) Miltenyi Biotec Cat# 130-091-051

Other

DynaMag-2 Magnet Thermo Fisher Scientific Cat# 12321D
Suspension, U-bottom, 96-well culture plate Sarstedt Cat# 83.3925.500
96-Well Clear V-Bottom TC-Treated Microplate VWR Cat# 29442-068
Bovine Serum Albumin BioShop Cat# ALB001
10 mL Pipette Reservoirs, Sterile Diamed Cat# MTCP8010-5S
UltraComp eBeads™ Plus Compensation Beads Thermo Fisher Scientific Cat# 01-3333-41
ArC™ Amine Reactive Compensation Beads Thermo Fisher Scientific Cat# A-10346
Trypan Blue Solution, 0.4% Thermo Fisher Scientific Cat# 15250061

Software and algorithms

FlowJo BD Biosciences www.flowjo.com