| Flow cytometry antibodies/reagents |
|
| Anti-human CD3 |
BioLegend |
Cat# 317308 (PE), 317306 (FITC), 317342; RRID AB_571913, AB_571907, AB_2563410
|
| Anti-human CD4 |
BioLegend |
Cat# 317408; RRID AB_571951
|
| Anti-human CD8 |
BioLegend |
Cat# 344722 (APC), 344704 (FITC), 344714; RRID AB_2075388, AB_1877178, AB_2044006
|
| Anti-human CD69 |
BioLegend |
Cat# 310914; RRID AB_314849
|
| Anti-human CD25 |
BioLegend |
Cat# 302606; RRID AB_314276
|
| Anti-human HLA-DR |
BioLegend |
Cat# 307610; RRID AB_314688
|
| Anti-human/mouse Granzyme B |
BioLegend |
Cat# 515403; RRID AB_2114575
|
| Anti-human TNF-alpha |
BioLegend |
Cat# 502908; RRID AB_315260
|
| Anti-human IFN-gamma |
BioLegend |
Cat# 506510; RRID AB_2623781
|
| FITC Mouse IgG1, κ Isotype Ctrl Antibody |
BioLegend |
Cat# 400108 |
| PE Mouse IgG1, κ Isotype Ctrl Antibody |
BioLegend |
Cat# 400112 |
| APC Mouse IgG1, κ Isotype Ctrl Antibody |
BioLegend |
Cat# 400120 |
| True-Nuclear Transcription Factor Buffer Set |
BioLegend |
Cat# 424401 |
| SYTOX Blue Viability Dye |
Thermo Fisher Scientific |
Cat# S34857 |
| LIVE/DEAD Fixable Aqua Dead Cell Dye |
Thermo Fisher Scientific |
Cat# L-34966 |
|
| Biological samples |
|
| Human blood from healthy donors |
UHN-REB (No. 11-0343-CE) |
N/A |
|
| Chemicals, peptides, and recombinant proteins |
|
| Lymphoprep |
STEMCELL Technologies |
Cat# 07851 |
| RPMI 1640 |
Wisent |
Cat# 350-000-CL |
| HBSS |
Wisent |
Cat# 311-513-CL |
| Human AB Serum |
Sigma |
Cat# H4522 |
| Fetal Bovine Albumin |
Thermo Fisher Scientific |
Cat# 12483020 |
| Bovine Serum Albumin |
BioShop |
Cat# ALB001 |
| Human IL-2 |
Miltenyi Biotec |
Cat# 130-097-743 |
| HEPES (1 M) |
Thermo Fisher Scientific |
Cat# 15630-080 |
| Penicillin-Streptomycin-Glutamine (100×) |
Thermo Fisher Scientific |
Cat# 10378-016 |
| Ammonium chloride (NH4Cl) |
Sigma |
Cat# 213330 |
| Potassium bicarbonate (KHCO3) |
Sigma |
Cat# 237205 |
| EDTA (0.5 M) |
Thermo Fisher Scientific |
Cat# 15575-020 |
| Phosphate-buffered saline (PBS) |
Thermo Fisher Scientific |
Cat# 10010049 |
| HBSS |
Thermo Fisher Scientific |
Cat# 14025092 |
| 5-Aza-2-deoxycytidine |
Sigma |
Cat# A3656-5MG |
|
| Critical commercial assays |
|
| CD8+ T cells negative selection kit |
Miltenyi Biotec |
Cat# 130-096-495 |
| CD8 MicroBeads |
Miltenyi Biotec |
Cat# 130-045-201 |
| Dynabeads Human T-Activator CD3/CD28 |
Thermo Fisher Scientific |
Cat# 11131D |
| Cell Stimulation plus Protein secretion inhibitor Cocktail (Cocktail 1 in this protocol) |
Thermo Fisher Scientific |
Cat# 00-4975-03 |
| Protein secretion inhibitor Cocktail (Cocktail 2 in this protocol) |
Thermo Fisher Scientific |
Cat# 00-4980-93 |
| QuadroMACS™ Starting Kit (LS) |
Miltenyi Biotec |
Cat# 130-091-051 |
|
| Other |
|
| DynaMag-2 Magnet |
Thermo Fisher Scientific |
Cat# 12321D |
| Suspension, U-bottom, 96-well culture plate |
Sarstedt |
Cat# 83.3925.500 |
| 96-Well Clear V-Bottom TC-Treated Microplate |
VWR |
Cat# 29442-068 |
| Bovine Serum Albumin |
BioShop |
Cat# ALB001 |
| 10 mL Pipette Reservoirs, Sterile |
Diamed |
Cat# MTCP8010-5S |
| UltraComp eBeads™ Plus Compensation Beads |
Thermo Fisher Scientific |
Cat# 01-3333-41 |
| ArC™ Amine Reactive Compensation Beads |
Thermo Fisher Scientific |
Cat# A-10346 |
| Trypan Blue Solution, 0.4% |
Thermo Fisher Scientific |
Cat# 15250061 |
|
| Software and algorithms |
|
| FlowJo |
BD Biosciences |
www.flowjo.com |