Fig. 1.
The Complementarity Plots (CPint and CPdock). The composite figure represents the two variants of the Complementarity Plot CPint and CPdock. CPint (upper panel) is the residue-wise plot, plotting the residue-wise complementarity estimates, Sm vs. Em [43] for interfacial residues—which is further distributed into three sub-plots (CPint1, CPint2, CPint3) based on their burial of solvent exposure (bur) of the plotted residues. CPdock (lower panel) is for the whole interface {Sc, EC}. The inner island colored in “purple,” the outer rim in “mauve,” and the rest in “sky blue” corresponds to the “probable,” “less probable,” and “improbable” regions of the plots. The pictorial demonstration is made on the very structure of 6VW1 (i.e., the RBDSpike–ACE2 complex in CoV-2) displayed at the right-bottom of the composite diagram. The interfacial residues of the ligand (RBDSpike: cyan cartoon) which are in physical contact with the receptor (ACE2: orange-yellow) are presented as their van der Waal’s dot surfaces colored according to their corresponding residences in CPint (“probable”: violet, “less probable”: magenta, “improbable”: violet-purple)