Table 3.
Primer names and sequences used for this study, including the new primers ITS5_hormo, ITS4_hormo and LROR_hormo and the Tulasnella-specific ITS4 primer, ITS4_tul, with melting temperature (Tm) in degrees Celsius. Point mutations are in bold, nucleotide additions are in bold and underlined and nucleotide deletions are shown as a blank space with a bold underline.
| Sequence (5’ to 3’) | Tm (°C) | Reference | |
|---|---|---|---|
| V9G | TTACGTCCCTGCCCTTTGTA | 56 | de Hoog & Gerrits van den Ende (1998) |
| ITS5 | GGAAGTAAAAGTCGTAACAAGG | 51 | White et al. (1991) |
| ITS5_hormo | GGAAGTACAAGTCGTAACAAGG | 53 | This study |
| ITS4 | TCCTCCGCTTATTGATATGC | 52 | White et al. (1991) |
| ITS4_tul | CCGCCAGATTCACACATTGA | 55 | Taylor & McCormick (2008) |
| ITS4_hormo | TCCTCCGCTGAATAATATGC | 52.1 | This study |
| LROR | ACCCGCTGAACTTAAGC | 52 | Moncalvo et al. (2000) |
| LROR_hormo | ACCCGCTTGA_TTTAAGC | 50 | This study |
| LR3 | CCGTGTTTCAAGACGGG | 53 | Moncalvo et al. (2000) |
| LR3R | GTCTTGAAACACGGACC | 50 | Moncalvo et al. (2000) |
| LR5 | TCCTGAGGGAAACTTCG | 51 | Moncalvo et al. (2000) |
| LR8 | CACCTTGGAGACCTGCT | 54 | Hopple & Vilgalys (1999) |