TABLE 2.
Detailed genetic information of top 20 most abundant lncRNAs/circRNAs in bovine and porcine milk EVs1
| lncRNA ID | lncRNA ID | circRNA ID | circRNA ID | circRNA ID | |
|---|---|---|---|---|---|
| Bovine milk EV | Porcine milk EV | Bovine milk EV | Bovine milk EV | Porcine milk EV | |
| Top 20 | (50–100 d) | (3 d) | (2 d) | (90 d) | (3 d) |
| 1 | Chr10: 42,863,856/42,864,152 | AEMK02000696.1: 79,195/97,543 | Chr3: 638,422/739,656 | Chr8: 100,351,443/100,353,491 | Chr14: 121,316,587/121,320,413 |
| 2 | Chr26: 17,917,472/17,972,241 | Chr7: 10,867,838/10,868,358 | Chr6: 87,270,299/87,276,280 | Chr6: 87,152,488/87,157,921 | Chr15: 77,234,645/77,283,482 |
| 3 | Chr6: 77,982,100/77,982,100 | AEMK02000407.1: 82,569/83,800 | Chr5: 41,157,982/41,297,645 | Chr6: 87,145,048/87,150,953 | Chr1: 119,487,613/119,500,634 |
| 4 | Chr6: 77,983,357/77,986,216 | AEMK02000603.1: 28,188/36,155 | Chr6: 109,933,165/110,018,362 | Chr26: 46,866,552/46,926,465 | Chr9: 7,476,477/7,481,586 |
| 5 | Chr8: 74,783,032/74,789,504 | AEMK02000358.1: 14,710/22,171 | Chr16: 58,714,416/58,733,499 | Chr6: 87,181,195/87,186,019 | Chr10: 29,037,749/29,038,934 |
| 6 | Chr27: 43,452,486/43,560,243 | AEMK02000665.1: 68,696/81,137 | Chr14: 65,829,343/65,832,220 | Chr3: 680,930/739,656 | Chr15: 60,407,129/60,414,442 |
| 7 | GJ058845.1: 24/1211 | Chr4: 101,819,215/101,872,430 | Chr3: 51,745,964/51,792,200 | Chr4: 79,458,313/79,618,721 | Chr1: 216,148,994/216,177,064 |
| 8 | Chr8: 61,266,610/61,284,332 | Chr5: 42,366,339/42,372,651 | Chr1: 155,995,947/156,077,037 | Chr5: 118,108,657/118,281,103 | Chr11: 5,503,064/5,507,316 |
| 9 | Chr2: 100,162,502/100,165,205 | AEMK02000495.1: 152,240/153,686 | Chr18: 15,677,553/15,769,596 | Chr2: 63,170,683/63,228,633 | Chr1: 45,173,523/45,175,843 |
| 10 | Chr20: 70,185,321/70,185,894 | Chr9: 42,551,562/42,617,514 | Chr5: 38,456,047/38,485,210 | Chr11: 25,674,108/25,745,152 | Chr3: 93,174,831/93,179,511 |
| 11 | Chr6: 19,792,457/19,802,292 | AEMK02000328.1: 317,535/358,163 | Chr10: 79,243,596/79,335,928 | Chr29: 25,303,168/25,338,898 | Chr18: 54,393,585/54,404,485 |
| 12 | Chr26: 17,969,399/17,971,287 | Chr14: 109,907,139/109,967,090 | Chr14: 73,650,350/73,691,478 | Chr13: 19,157,964/19,330,999 | Chr10: 69,201,375/69,235,186 |
| 13 | Chr8: 620,509/6,207,288 | AEMK02000301.1: 78,258/97,242 | Chr6: 20,604,830/20,700,712 | Chr4: 92,833,700/92,950,401 | Chr17: 13,008,091/13,031,589 |
| 14 | GJ058260.1: 2/1519 | AEMK02000135.1: 3328/8711 | Chr17: 7,077,165/7,125,454 | Chr3: 102,324,607/102,362,801 | Chr1: 1,654,691/1,663,793 |
| 15 | Chr8: 61,266,453/61,284,374 | AEMK02000205.1: 16,230/24,313 | Chr12: 11,730,279/11,824,957 | Chr6: 70,427,322/70,515,551 | Chr7: 113,369,840/113,371,752 |
| 16 | Chr6: 19,799,937/19,802,292 | Chr5: 61,105,793/61,114,297 | Chr14: 4,513,617/4,527,572 | Chr16: 58,714,416/58,733,499 | Chr8: 18,861,487/18,879,156 |
| 17 | Chr8: 6,205,093/6,207,288 | AEMK02000220.1: 7139/8444 | Chr10: 45,489,842/45,610,796 | Chr4: 105,645,266/105,685,635 | Chr12: 59,319,171/59,331,703 |
| 18 | GJ058260.1: 2/1519 | Chr6: 62,037,122/62,045,112 | Chr11: 40,550,350/40,623,558 | Chr17: 10,435,130/10,463,829 | Chr18: 10,283,698/10,300,806 |
| 19 | GJ058845.1: 69/1107 | AEMK02000220.1: 15,348/18,156 | Chr10: 93,250,197/93,310,748 | Chr26: 43,911,446/43,954,980 | Chr18: 54,260,018/54,270,584 |
| 20 | Chr6: 17,938,105/17,939,902 | Chr4: 46,447,193/46,450,808 | Chr9: 95,143,978/95,207,141 | Chr13: 7,280,480/7,331,583 | Chr1: 263,932,774/263,940,366 |
| Reference | (21) | (59) | (58) | (58) | (59) |
1
Chr, chromosome; circRNA, circular RNA; d, days; EV, extracellular vesicle; ID, identity document; lncRNA, long noncoding RNA.