Table 3.
Affinity and stability prediction for the paired peptides PLEASE ALSO IN THIS TABLE CHANGE COMMAS WITH DECIMAL DOT
| HLA | Epitope seq | Affinity (nM) | TAA | Class | Tumor | Pathogen | ID seq |
| A*02:01 | ILDKVLVHL | 23,6 | CLPP | Mutation | Melanoma | ||
| ILEKVHVHL | 378,08 | L1 capsid protein (HPV) | AEQ98783.1 | ||||
| ILDCVLVHL | 12,61 | E1 protein (HPV) | AYA94830.2 | ||||
| A*03:01 | ILDAVVAQK | 131,69 | EFTUD2 | Mutation | Melanoma | ||
| IIDAVVSQK | 117,57 | Non-structural protein (Chikungunya virus) | AND80849.1 | ||||
| A*24:02 | NYKRCFPVI | 76,24 | MAGE-A4 | Tumor specific | Multiple | ||
| NYKKCYPKI | 118,22 | Human rotavirus A | CAA54177.1 | ||||
| A*02:01 | IMIGVLVGV | 3,61 | CEA | Differentiation | Gut ca | ||
| IMVGALIGV | 4,86 | Env protein (HIV-1) | ALF12185.1 | ||||
| IIIGALVGV | 8,04 | Env protein (HIV-1) | AAL98851.1 | ||||
| A*02:01 | MLGTHTMEV | 7,3 | gp100 | Differentiation | Melanoma | ||
| MLGTHAMLV | 12,6 | Membrane protein UL20 HHV5 | AKI23125.1 | ||||
| A*02:01 | MLLAVLYCL | 9,16 | Tyrosinase | Differentiation | Melanoma | ||
| NLLAVLYCV | 6,18 | Gag protein (HIV-1) | AAA45294.1 | ||||
| NTLAVLYCV | 38,61 | Gag protein (HIV-1) | AAS45421.1 | ||||
| MLLAALMIV | 5,38 | Env protein (HERVK) | CAA76880.1 | ||||
| A*03:01 | ALNFPGSQK | 15,05 | Gp100 | Differentiation | Melanoma | ||
| ALNFPGKWK | 36,42 | Pol (HIV-1) | AWT86382.1 | ||||
| A*02:01 | RLMNDMTAV | 3,39 | HSPH1 | Overexpressed | Ubiquitous | ||
| RLADDMTSV | 5,65 | Large tegument protein (HSV-2) | AMB66144.1 | ||||
| A*02:01 | RLAPFVYLL | 3,57 | HEPACAM | Overexpressed | LIVER | ||
| RLAPFGYKI | 24,96 | polyprotein (Vilyuisk human encephalomyelitis virus) | ACG55801.1 | ||||
| A*02:01 | LLNAFTVTV | 4,62 | CD274 | Overexpressed | Multiple tissues | ||
| LLNAFAIAV | 8,96 | Env protein (HIV-1) | AXP14971.1 | ||||
| A*02:01 | RLVDDFLLV | 5,33 | Telomerase | Overexpressed | Multiple tissues | ||
| RLVDEFLAI | 18,98 | Env protein (HIV-1) | AKR69573.1 | ||||
| RLVNDFLAL | 30,13 | Env protein (HIV-1) | ASN74133.1 | ||||
| A*02:01 | LLLLTVLTV | 23,85 | MUC1 | Overexpressed | Gland epithelial | ||
| LLLNTVLTV | 5,88 | ORF46 (HHV8) | QKE51297.1 | ||||
| A*02:01 | LLSDDDVVV | 32,87 | KIF20A | Overexpressed | Ubiquitous | ||
| SLAEDDVVV | 33,9 | Env protein (HIV-1) | QCC27033.1 | ||||
| A*02:01 | KMDAEHPEL | 35,44 | Secernin 1 | Overexpressed | Ubiquitous | ||
| RMDAEHPGL | 94,22 | Pol PB1 (influenza B virus) | AXA17413.1 | ||||
| KMDEEHPGL | 20,99 | Pol PB1 (influenza B virus) | ABL77000.1 | ||||
| A*03:01 | LASFKSFLK | 90,6 | RGS5 | Overexpressed | Ubiquitous | E1 (HPV 57) | BAF80482.1 |
| LAAFKSFLK | 78,01 | ||||||
TAA, tumor-associated antigen.