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. 2020 May 26;18(6):1545–1561. doi: 10.1038/s41423-020-0440-9

Table 2.

Pseudo gene usage in GC events occurred at VL of L15H15 strains treated with TSA for 42 days

LC CDR1 CDR2 CDR3
A12-3 A12-4 A12-5 B7-3 B7-9 B7-11 A12-3 A12-4 A12-5 B7-3 B7-9 B7-11 A12-3 A12-4 A12-5 B7-3 B7-9 B7-11
Total readsa 2625 2264 2977 2370 2093 1717 2625 2264 2977 2370 2093 1717 2625 2264 2977 2370 2093 1717
V 2548 2203 2824 2301 1836 1618 2557 2211 2881 2321 2061 1680 2153 1869 2373 2019 1763 1495
Full matchb 2 2 6 20 6 9 15 13 20 15 12 16 10 6 15 6 5 2
pVL001 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
pVL003 0 0 1 2 0 0 0 0 1 6 2 1 0 0 1 0 0 0
pVL005 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0
pVL007 0 0 0 7 1 0 0 0 2 6 1 0 0 0 2 0 1 0
pVL009 2 2 3 9 5 8 2 0 4 0 3 10 0 0 0 1 0 0
pVL011 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
pVL013 0 0 0 0 0 0 7 2 2 0 1 0 1 0 0 0 0 0
pVL015 0 0 0 0 0 0 4 0 0 0 1 1 0 0 0 0 0 0
pVL017 0 0 0 0 0 0 1 11 9 0 2 4 0 0 0 0 0 0
pVL019 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0
pVL021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
pVL023 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0
pVL025 0 0 0 2 0 0 0 0 0 2 2 0 3 1 0 4 1 0
pVL027 0 0 2 0 0 1 1 0 2 1 0 0 3 1 2 1 3 2
pVL029 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Partial matchc 17 10 2 3 4 12 3 0 3 9 0 2 2 1 2 0 0 1

aThe total number of observed sequences in each library

bThe number of sequence in which whole pseudo gene sequence is copied

cThe number of sequences not identical to any of initial V sequence or pseudo genes