Table 2.
Pseudo gene usage in GC events occurred at VL of L15H15 strains treated with TSA for 42 days
| LC | CDR1 | CDR2 | CDR3 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A12-3 | A12-4 | A12-5 | B7-3 | B7-9 | B7-11 | A12-3 | A12-4 | A12-5 | B7-3 | B7-9 | B7-11 | A12-3 | A12-4 | A12-5 | B7-3 | B7-9 | B7-11 | |
| Total readsa | 2625 | 2264 | 2977 | 2370 | 2093 | 1717 | 2625 | 2264 | 2977 | 2370 | 2093 | 1717 | 2625 | 2264 | 2977 | 2370 | 2093 | 1717 |
| V | 2548 | 2203 | 2824 | 2301 | 1836 | 1618 | 2557 | 2211 | 2881 | 2321 | 2061 | 1680 | 2153 | 1869 | 2373 | 2019 | 1763 | 1495 |
| Full matchb | 2 | 2 | 6 | 20 | 6 | 9 | 15 | 13 | 20 | 15 | 12 | 16 | 10 | 6 | 15 | 6 | 5 | 2 |
| pVL001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| pVL003 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 6 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| pVL005 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 0 | 0 | 0 |
| pVL007 | 0 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 2 | 6 | 1 | 0 | 0 | 0 | 2 | 0 | 1 | 0 |
| pVL009 | 2 | 2 | 3 | 9 | 5 | 8 | 2 | 0 | 4 | 0 | 3 | 10 | 0 | 0 | 0 | 1 | 0 | 0 |
| pVL011 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| pVL013 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 2 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| pVL015 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| pVL017 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 11 | 9 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| pVL019 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 |
| pVL021 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| pVL023 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 |
| pVL025 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 3 | 1 | 0 | 4 | 1 | 0 |
| pVL027 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 3 | 1 | 2 | 1 | 3 | 2 |
| pVL029 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Partial matchc | 17 | 10 | 2 | 3 | 4 | 12 | 3 | 0 | 3 | 9 | 0 | 2 | 2 | 1 | 2 | 0 | 0 | 1 |
aThe total number of observed sequences in each library
bThe number of sequence in which whole pseudo gene sequence is copied
cThe number of sequences not identical to any of initial V sequence or pseudo genes