Table 2. Total number of CPE isolates per genus and genotype, Switzerland, 2013–2018 (n = 682).
Klebsiella spp. | Escherichia coli | Enterobacter spp. | Citrobacter spp. | Proteus spp. | Providencia spp. | Others | Total | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
IMP | n | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | |||||||
% | 100 | < 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | |||||||
KPC | n | 153 | 9 | 5 | 1 | 0 | 1 | 2 | 171 | |||||||
% | 90 | 40 | 5 | 5 | 3 | 9 | < 1 | 3 | 0 | 0 | < 1 | 14 | 1 | 17 | 25 | |
NDM | n | 66 | 41 | 21 | 9 | 3 | 5 | 1 | 146 | |||||||
% | 45 | 17 | 28 | 22 | 14 | 40 | 6 | 28 | 2 | 33 | 3 | 71 | < 1 | 8 | 21 | |
OXA-181 | n | 7 | 17 | 0 | 1 | 0 | 0 | 1 | 26 | |||||||
% | 27 | 2 | 65 | 9 | 0 | 4 | 3 | 0 | 0 | 4 | 8 | 4 | ||||
OXA-48 | n | 144 | 113 | 15 | 13 | 0 | 1 | 6 | 292 | |||||||
% | 50 | 38 | 39 | 61 | 5 | 28 | 5 | 41 | 0 | < 1 | 14 | 2 | 50 | 43 | ||
OXA-other | n | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | |||||||
% | 50 | < 1 | 50 | < 1 | 0 | 0 | 0 | 0 | 0 | 0 | ||||||
VIM | n | 11 | 5 | 12 | 8 | 6 | 0 | 2 | 44 | |||||||
% | 25 | 3 | 11 | 3 | 27 | 23 | 18 | 25 | 14 | 67 | 0 | 5 | 17 | 7 | ||
Total | n | 383 | 186 | 53 | 32 | 9 | 7 | 12 | 682 | |||||||
% | 56 | 27 | 8 | 5 | 1 | 1 | 2 | 100 |
CPE: carbapenemase-producing Enterobacterales; IMP: Imipenemase; KPC: Klebsiella pneumoniae carbapenemase; NDM: New Delhi metallo-β-lactamase; OXA: Oxacillinase; VIM: Verona integron–encoded metallo-β-lactamase.
Left cell: Percentages relative to total count per row; right cell: Percentages relative to total count per column.
The category ‘others’ includes Pluralibacter spp., Raoultella spp., Salmonella spp., Serratia spp. and unknowns. The category ‘OXA-other’ includes the OXA-232 and OXA-244 genotypes. For a non-aggregated view of species and genotypes, see Supplementary Table S3.