Table 4.
The kinase‐, miRNA‐ and TF‐target networks of SNRPC in HCC. FDR, FDR from Benjamini and Hochberg from GSEA; LeadingEdgeNum, the number of leading‐edge genes; V$, the annotation found in Molecular Signatures Database for TF.
| Category | Geneset | LeadingEdgeNum | FDR |
|---|---|---|---|
| Kinase target | Kinase_CDK5 | 29 | 0.059058 |
| Kinase_MAPK1 | 77 | 0.064933 | |
| Kinase_MAPK7 | 13 | 0.065269 | |
| Kinase_MYLK | 4 | 0.068161 | |
| Kinase_MYLK3 | 4 | 0.068161 | |
| miRNA target | AAGCCAT, MIR‐135A, MIR‐135B | 129 | 0 |
| CACTTTG, MIR‐520G, MIR‐520H | 97 | 0 | |
| GTGCCTT, MIR‐506 | 229 | 0 | |
| TGGTGCT, MIR‐29A, MIR‐29B, MIR‐29C | 201 | 0 | |
| ACACTGG, MIR‐199A, MIR‐199B | 72 | 0 | |
| TF target | GGAANCGGAANY_UNKNOWN | 38 | 0 |
| YNGTTNNNATT_UNKNOWN | 109 | 0 | |
| V$HFH3_01 | 66 | 0.000435 | |
| TTAYRTAA_V$E4BP4_01 | 74 | 0.000454 | |
| SMTTTTGT_UNKNOWN | 129 | 0.000471 |