Table 2. Default values for each parameter in our mathematical model and varying parameters used in figures showing 1D parameter scans.
βX: production rate for X; vX: degradation rate for X; θX,Y: threshold above which Y has an effect on X; CX,Y: coefficient for regulatory functions of Y acting on X; h: exponent of regulatory functions; V: effective system volume (modulates noise). All parameter units are arbitrary.
| Default | Figure 5B–D | Figure 5—figure supplement 2A | Figure 5—figure supplement 2B | Figure 5—figure supplement 2C | Figure 5—figure supplement 2D | |
|---|---|---|---|---|---|---|
| βABA | 1 | Varying | ||||
| βGA | 0.3 | |||||
| βGA,Z | 0.01 | |||||
| βZ | 39 | |||||
| βI | 0.3 | |||||
| vABA | 1 | 1.58 | ||||
| vGA | 1 | |||||
| vZ | 0.1 | |||||
| vI | 0.4 | |||||
| θABA,I | 3.7 | |||||
| θGA,I | 1.2 | |||||
| θI,ABA | 6.5 | Varying | 10 | 10 | ||
| θI,GA | 6 | Varying | Varying | |||
| CABA,I | 10 | |||||
| CGA,I | 4 | |||||
| CI,ABA | 10 | |||||
| CI,GA | 6 | |||||
| h | 4 | |||||
| V | 30 | 100 | Varying |