Table 3.
Results of the multiplex PCR for the detection of 73 strains.
| Strain ID | Source | Results by hsp60 typing or MS | Results by the multiplex PCR |
|---|---|---|---|
| 1 | Clinical sample | A. baumannii | N a |
| 2 | Clinical sample | E. hormaechei | EH |
| 3 | Clinical sample | A. baumannii | N |
| 4 | Clinical sample | K. pneumoniae | N |
| 5 | Clinical sample | K. pneumoniae | N |
| 6-3 | Sewage water | E. roggenkampii | ER |
| 5-6 | Sewage water | E. roggenkampii | ER |
| 8-4 | Sewage water | E. asburiae | N |
| 86 | Clinical sample | A. baumannii | N |
| 87 | Clinical sample | A. baumannii | N |
| 93 | Clinical sample | S. marcescens | N |
| 113 | Clinical sample | E. coli | N |
| 119 | Clinical sample | S. marcescens | N |
| 120 | Clinical sample | E. coli | N |
| 262 | Clinical sample | E. coli | N |
| 289 | Clinical sample | P. aeruginosa | N |
| 422 | Sewage water | E. kobei | EK |
| 430 | Clinical sample | F. meningosepticum | N |
| 435 | Clinical sample | F. meningosepticum | N |
| 436 | Clinical sample | F. meningosepticum | N |
| 437 | Clinical sample | K. pneumoniae | N |
| 438 | Clinical sample | K. pneumoniae | N |
| 439 | Clinical sample | K. pneumoniae | N |
| 689 | Animal feces | E. hormaechei | EH |
| 690 | Animal feces | E. hormaechei | EH |
| 695 | Clinical sample | P. aeruginosa | N |
| 981 | Sewage water | E. roggenkampii | ER |
| 982 | Sewage water | E. roggenkampii | ER |
| 983 | Sewage water | E. roggenkampii | ER |
| 1122 | Clinical sample | E. hormaechei | EH |
| 1123 | Clinical sample | E. hormaechei | EH |
| 1135 | Clinical sample | E. roggenkampii | ER |
| 1136 | Clinical sample | E. roggenkampii | ER |
| 1140 | Clinical sample | E. kobei | EK |
| 1146 | Clinical sample | E. roggenkampii | ER |
| 1166 | Clinical sample | E. asburiae | N |
| 1167 | Clinical sample | E. coli | N |
| 1187 | Sewage water | E. roggenkampii | ER |
| 1276 | Clinical sample | E. kobei | EK |
| 1277 | Clinical sample | E. kobei | EK |
| 1278 | Clinical sample | E. kobei | EK |
| 1279 | Clinical sample | E. roggenkampii | ER |
| 1280 | Clinical sample | E. roggenkampii | ER |
| 1281 | Clinical sample | E. roggenkampii | ER |
| 1282 | Clinical sample | E. kobei | EK |
| 1335 | Clinical sample | E. roggenkampii | ER |
| 1336 | Clinical sample | E. asburiae | N |
| 1337 | Clinical sample | E. kobei | EK |
| 1338 | Clinical sample | E. roggenkampii | ER |
| 1339b,c | Clinical sample | E. asburiae | N |
| 1340 c | Clinical sample | E. asburiae | N |
| 1341 | Clinical sample | E. kobei | EK |
| 1342 c | Clinical sample | E. asburiae | N |
| 1372 | Clinical sample | E. hormaechei | EH |
| 1377 | Clinical sample | E. hormaechei | EH |
| 1378 | Clinical sample | E. hormaechei | EH |
| 1379 | Clinical sample | E. roggenkampii | ER |
| 1380 | Clinical sample | E. roggenkampii | ER |
| 1381 | Clinical sample | E. hormaechei | EH |
| 1382 | Clinical sample | E. hormaechei | EH |
| 1383b,c | Clinical sample | E. asburiae | N |
| 1384 | Clinical sample | E. cloacae | EC |
| 1385 | Clinical sample | E. hormaechei | EH |
| 1386 | Clinical sample | E. hormaechei | EH |
| 1387 | Clinical sample | E. hormaechei | EH |
| 1388 | Clinical sample | E. hormaechei | EH |
| 1389 | Clinical sample | E. hormaechei | EH |
| 1390 | Clinical sample | E. hormaechei | EH |
| 8467 | Clinical sample | E. kobei | EK |
| 12740 c | Clinical sample | E. asburiae | N |
| 6069 c | Clinical sample | E. asburiae | N |
| 6530 | Clinical sample | E. hormaechei | EH |
| 9636 | Clinical sample | E. asburiae | N |
N, Negative.
Strains were sequenced by WGS.
The hsp60 sequences of strains clustered together without any of type sequences.