Table 3.
Consensus target sequences of SARS-CoV-2 RdRp gene revealed through multiple sequence alignment of the targets obtained by RNAxs web server.
| Consensus target sequence no. | Consensus target sequences |
|---|---|
| A | GGCCAATGTTAATGCACTT |
| B | GCCAATGTTAATGCACTTT |
| C | GCTAGCATAAAGAACTTTA |
| D | TCCACTGCTTCAGACACTT |
| E | CCCTACTATAACTCAAATG |
| F | TCCCTACTATAACTCAAAT |
| G | GACATCTATGAAGTATTTT |
| H | TGACATCTATGAAGTATTT |
| I | CACACCGTTTCTATAGATT |
| J | GCTTGTCACACCGTTTCTA |
| K | CGGTTCACTATATGTTAAA |
| L | CGGTTCACTATATGTTAAA |
| M | TCAGTTCTTTATTATCAAA |
| N | TCTCTATCTGTAGTACTAT |
| O | AGACAGTTTCATCAAAAAT |
| P | GACAGTTTCATCAAAAATT |
| Q | ACAGTTTCATCAAAAATTA |
| R | CAGTTTCATCAAAAATTAT |
| S | TCTTTATTATCAAAACAAT |
| T | AGTAATTGGAACAAGCAAA |
| U | CCTAACATGCTTAGAATTA |
| V | AGGACTTCCTTGGAATGTA |
| W | CGCATATACAAAACGTAAT |
| X | GCATATACAAAACGTAATG |
| Y | GGATTATCCTAAATGTGAT |