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. 2021 May 25:1–30. doi: 10.1080/07391102.2021.1913228

Table 8.

Interacting amino acids for Drugs having G-Score above Hydroxyquinoline for Papain Protease of SARS-COV-2 (PDB ID: 6W9C).

Compound Mode of Action Hydrophobic Polar п-п Stacking H-Bond Charged
graphic file with name TBSD_A_1913228_ILG0046_B.gif Antimalarial, Anti-inflammatory Chain A: Gly160, Leu162
Chain B: Leu162, Val159, Cys270, Gly160
Chain C: Leu162, Val159
Gly160, Trp106, Cys270
Chain A: Asn109, Gln269 Chain B: Asn109, Gln269
Chain C: Asn109, His89, Gln269
Chain B: Glu161
Chain C: Asn109, Asp108
  Chain A: Glu161
Chain B: Glu161, Asp108
Chain C: Asp108
graphic file with name TBSD_A_1913228_ILG0047_B.gif Tyrosine Kinase inhibitor; Epidermal Growth Factor Receptor (EGFR) inhibitor Chain A: Val159, Gly160, Leu162
Chain B: Val159, Gly160, Trp106, Cys270
Chain C: Val159, Leu162, Gly160, Cys270
Chain A: Asn109, Gln269, Thr158
Chain B: Asn109, Gln269, His89
Chain C: Thr158, Gln 269, Asn109
  Chain C: Asn109 Chain A: Glu161, Chain B: Asp108, Chain C: Glu161
graphic file with name TBSD_A_1913228_ILG0048_B.gif Anti-HIV
Protease inhibitor
Chain A: Leu162, Val159, Gly160
Chain B: Leu162, Val159, Cys270
Chain C: Leu162, Val159, Cys270, Gly160
Chain A: Thr158, Asn109, Gln269
Chain B: Thr158, Asn109, Gln269, His89, Ser85
Chain C: Thr158, Asn109, Gln269,
Chain B: Leu162, Val159, Gly160
Chain C: Asp108, Asn109
  Chain A: Glu161
Chain B: 161
Chain C: Glu161, Asp108
graphic file with name TBSD_A_1913228_ILG0049_B.gif Anti-HIV
Protease inhibitor
Chain A: Val159, Gly160, Leu162
Chain B: Leu162, Cys270, Gly160
Chain C: Cys270, Leu162, Val159
Chain A: Asn109, Thr158, Gln269
Chain B: Asn109, Gln269
Chain C: His89, Gln269
    Chain A: Asp108, Glu161
Chain B: Glu161
Chain C: Glu161, Asp108
graphic file with name TBSD_A_1913228_ILG0050_B.gif 2 adrenoceptors agonist, muscarinic receptor antagonist Chain A: Val159, Ala86
Chain B: Leu162, Tyr171, Gly160
Chain C: Trp93, Ala107, Val159
Chain A: Thr58, Ser85, His89
Chain B: Asn156, His89
Chain C: Asp108, Chain B: Glu161   Chain A: Glu161, Arg82, Lys157
Chain B: Glu167, Glu161
Chain C: Lys92, Asp108
graphic file with name TBSD_A_1913228_ILG0051_B.gif Antineoplastic
Inhibits RNA
Polymerase activity
Chain A: Val159, Leu162, Ala86, Gly160
Chain B: Val159, Cys270
Chain C: Leu162, Cys270, Gly160
Chain A: Thr158, Ser85, His89, Gln269
Chain B: Gln269, His89, Asn109
Chain C: Asn109, Gln269, Thr158
Chain A: Val159   Chain A: Arg82, Glu161
Chain B: Asp108
Chain C: Glu161
graphic file with name TBSD_A_1913228_ILG0052_B.gif Antimalarial Drug
Anti-arthritis
Chain A: Leu162, Gly160
Chain B: Leu162, Val159, Cys270, Gly160
Chain A: Asn109, Gln269, Thr158, Chain B: Thr158, Gln269, Asn109
Chain C: Asn109, Gln269
Chain A: Gly160
Chain B: Val159,
Chain A: Gly160
Chain B: Val159
Chain A: Glu161
Chain B: Glu161
graphic file with name TBSD_A_1913228_ILG0053_B.gif Topoisomerase Inhibitor Chain A: Leu162, Val159
Chain B: Val159, Gly160, Leu162, Cys270
Chain C: Val159, Leu162, Gly160, Cys270
Chain B: Thr158, Gln269, Asn109
Chain A: Gln269, Thr158, Asn109
Chain C: Asn109, Gln269
Chain B: Gly160   Chain B: Glu161, Asp108
Chain A: Arg108
Glu161
Chain C: Glu161, Asp108
graphic file with name TBSD_A_1913228_ILG0054_B.gif Anti-HIV Inhibitor Chain A: Leu162 Chain B: Leu162, Gly160, Cys270, Val159
Chain C: Leu162, Gly160, Val159
Chain A: Thr158, Asn109, Gln269
Chain B: Thr158, Gln269, Asn109
Chain C: Asn109, Gln269
Chain B: Leu162, Val159   Chain B: Glu161
Chain A: Glu161
Chain C: Asp108
graphic file with name TBSD_A_1913228_ILG0055_C.gif Antimalarial Drug Chain A: Leu162, Gly160
Chain B: Leu162, Gly160, Cys270, Val159
Chain C: Leu162, Gly160
Chain A: Thr158, Gln269
Chain B: Thr158, Gln269, Asn109, His89
Chain C: Asn109, Gln269
Chain B: Asn109   Chain A: Glu161
Chain B: Asp108
Chain C: Glu161
graphic file with name TBSD_A_1913228_ILG0056_B.gif Tyrosine Kinase inhibitor; Epidermal Growth Factor Receptor (EGFR) inhibitor Chain A: Leu162, Gly160
Chain B: Leu162, Gly160, Cys270, Chain C: Leu162, Gly160, Ala86, Val159, Cys270
Chain A: Asn109, Gln269
Chain B: Asn109, Gln269 Chain C: Asn109, Gln269, His89, Thr158, Ser85
Chain C: Val159   Chain A: Glu161 Chain B: Glu161 Chain C: Glu161, Asp108
graphic file with name TBSD_A_1913228_ILG0057_B.gif Antiviral
Drug
Chain A: Leu162, Gly160, Val159
Chain B: Leu162, Gly160, Cys270, Val159
Chain C: Leu162, Gly160, Val159, Cys270
Chain A: Asn109, Thr158, Gln269 Chain B: Gln269, Asn109, His89, Thr158
Chain C: Gln269, Asn109, Thr158
Chain C: Asn109
Chain B: Asn109, Gly160
  Chain A: Glu161 Chain B: Asp108, Glu161
Chain C: Glu161, Asp108