TABLE 2.
Group | KEGG ID | Pathway terms | Fold enrichment | Entrez IDs of genes |
LNV vs. DNV | gga00190 gga04620 gga03020 | -Oxidative phosphorylation -Toll-like receptor signaling pathway -RNA polymerase | 3.05 2.5 1.5 | -PPA2, NDUFA5, NDUFS6, COX7C, UQCRFS1, NDUFB5 -NFKBIA, PIK3CG, TOLLIP, MAPK12, IRAK4 -POLR1D, POLR2F, POLR2D |
LPHV vs. DPHV | gga01100 gga03320 | -Metabolic pathways -PPAR signaling pathway | 14.3 2.9 | -PNLIPRP1, PSPH, ALDOB, SIIL, PLA2G1B, ATP5A1W, CEL, FUT9, ADH1C, GATM, TCIRG1, HPD, PLA2G1BL, AMY2A, UGT1A1 -SCD, APOC3, FABP1 |
LIV vs. DIV | gga01100 | -Metabolic pathways | 12.5 | -PNLIPRP1, SIIL, PLA2G1B, CEL, PLA2G1BL, FUT9, AMY2A |
All the pathways with a modified Fisher exact P-value < 0.05 and a threshold gene count of 2 were considered enriched.