Table 3.
The MM/GBSA binding free energy and electrostatic (ELE) and VDW energies (VDWAALS) components (kcal/mol) of all native and mutated peptides during the last 10 ns of MD simulation.
Peptide | Generalized Born energy | ELE energy | VDWAALS energy |
---|---|---|---|
Hp1090 | −20.78 ± 9.61 | 29.85 ± 28.08 | −34.59 ± 13.88 |
Meucin-13 | −19.41 ± 8.21 | 19.84 ± 23.39 | −33.77 ± 9.72 |
Meucin-18 | −40.12 ± 10.08 | −32.90 ± 32.96 | −61.95 ± 13.65 |
Mut1 | −49.10 ± 7.56 | −149.23 ± 33.53 | −57.97 ± 6.58 |
Mut2 | −41.66 ± 10.07 | −39.77 ± 51.26 | −61.40 ± 10.46 |
Mut3 | −47.31 ± 10.32 | 32.20 ± 32.55 | −72.30 ± 10.10 |
Mut4 | −44.82 ± 5.81 | −6.79 ± 32.48 | −66.77 ± 5.78 |
Mut5 | −39.34 ± 11.49 | −13.20 ± 23.22 | −71.77 ± 9.79 |
Mut6 (Mut1+Mut4) | −29.69 ± 8.33 | −26.60 ± 41.28 | −51.30 ± 9.60 |