Table 2.

Quality control parameters of comprehensive transcriptome sequencing (RNA-Seq).

Parameters		(N) Thp-1 mock	(O) Thp-1 + N6 wt MOI10	(Q) Thp-1 + N6 858 MOI10	(Z) Thp-1 mock	(A1) Thp-1 + ADP-heptose 5 µM	(A2) Thp-1 mock	(B2) Thp-1 + ADP-heptose 5 µM
Mapping statistics	Reads mapped (%)	81.85	81.88	80.87	83.99	82.23	82.55	82.03
	Reads not mapped (%)	18.15	18.12	19.13	16.01	17.77	17.45	17.97
Fragment counting	Unique (%)	79.12	79.25	78.1	81.47	79.52	79.83	79.27
	Non-specifically (%)	2.73	2.61	2.77	2.52	2.71	2.72	2.76
Counted fragments by type	Intergenic (%)	11.17	10.79	11.65	9.56	10.26	7.72	8.03