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. Author manuscript; available in PMC: 2021 Jun 4.
Published in final edited form as: Nat Struct Mol Biol. 2021 Feb 25;28(3):258–267. doi: 10.1038/s41594-020-00554-6

Extended Data Table 1.

Cryo-EM data collection, refinement and validation statistics

NTS-NTSR1-Gi-cND canonical state, AHD and nanodisc mask out (EMD-23099, PDB 7L0P) NTS-NTSR1-Gi-cND canonical state, overall (EMD-23100, PDB 7L0Q) NTS-NTSR1-Gi-cND noncanonical state, AHD and nanodisc mask out (EMD-23101, PDB 7L0R) NTS-NTSR1-Gi-cND noncanonical state, overall (EMD-23102, PDB 7L0S)
Data collection and processing
Magnification 105,000 105,000 105,000 105,000
Voltage (kV) 300 300 300 300
Electron exposure (e-2) 57 57 57 57
Defocus range (μm) −1.2 to −2.5 −1.2 to −2.5 −1.2 to −2.5 −1.2 to −2.5
Pixel size (Å) 0.825 0.825 0.825 0.825
Symmetry imposed C1 C1 C1 C1
Initial particle images (no.) 4,367,542 4,367,542 4,367,542 4,367,542
Final particle images (no.) 575,791 575,791 324,002 324,002
Map resolution (Å) 4.1 4.3 4.2 4.5
FSC threshold 0.143 0.143 0.143 0.143
Refinement
Initial model used (PDB code) 4BUO, 1GP2, 6OY9
Map sharpening B factor (Å2) −245 −222 −204 −228
Model composition
 Non-hydrogen atoms 6954 7892 6968 7906
 Protein residues 882 (6896 atoms) 996 (7834 atoms) 881 (6910 atoms) 995 (7848 atoms)
 Ligands 1 (6 residues, 58 atoms) 1 (6 residues, 58 atoms) 1 (6 residues, 58 atoms) 1 (6 residues, 58 atoms)
B factors (Å2)
 Protein 73.6 69.75 73.63 69.79
 Ligand 66.76 66.76 66.76 66.76
R.m.s. deviations
 Bond lengths (Å) 0.006 0.007 0.007 0.008
 Bond angles (°) 1.051 1.286 1.368 1.508
Validation
MolProbity score 1.9 1.84 1.96 2
Clashscore 8.36 7.82 9.79 9.27
Poor rotamers (%) 0.53 0.7 1.05 1.39
Ramachandran plot
 Favored (%) 93.1 93.69 93.44 93.99
 Allowed (%) 6.9 6.31 6.56 6.01
 Disallowed (%) 0 0 0 0