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. 2021 Jan 15;12(8):2993–3003. doi: 10.1039/d0sc06645a

Variation of the ASO or SNA based on their base modification, target, spacer region and conjugation. FANA = 2′-fluoroarabino nucleic acid with phosphothioate (PS) linkages. ASO = antisense oligonucleotide with PS linkages against firefly luciferase. SNA = strand with 12 units of dodecanediol that assembles into spherical nucleic acid. PO-dN4/8 = 4 or 8 nucleotide spacer with phosphate linkages (PO). PS-dN4/8 = 4 or 8 nucleotide spacer with PS linkages. Survivin = FANA antisense oligonucleotide with PS linkages against survivin. NegativeASO = non-targeting sequence with PS linkages. mmASO = antisense oligonucleotide against firefly luciferase with 3 mismatches and PS linkages. APOB = FANA antisense oligonucleotide against APOB with PS linkages.

Strand name Base modification Target Spacer Conjugate Symbol
FANA-ASO FANA Luciferase graphic file with name d0sc06645a-u1.jpg
FANA-SNA FANA Luciferase (Dodecanediol) × 12 graphic file with name d0sc06645a-u2.jpg
FANA-(PO-dN4)-ASO FANA Luciferase (PO-dN4) graphic file with name d0sc06645a-u3.jpg
FANA-(PO-dN4)-SNA FANA Luciferase (PO-dN4) (Dodecanediol) × 12 graphic file with name d0sc06645a-u4.jpg
FANA-(PS-dN4)-ASO FANA Luciferase (PS-dN4) graphic file with name d0sc06645a-u5.jpg
FANA-(PS-dN4)-SNA FANA Luciferase (PS-dN4) (Dodecanediol) × 12 graphic file with name d0sc06645a-u6.jpg
FANA-(PO-dN8)-ASO FANA Luciferase (PO-dN8) graphic file with name d0sc06645a-u7.jpg
FANA-(PO-dN8)-SNA FANA Luciferase (PO-dN8) (Dodecanediol) × 12 graphic file with name d0sc06645a-u8.jpg
FANA-(PS-dN8)-ASO FANA Luciferase (PS-dN8) graphic file with name d0sc06645a-u9.jpg
FANA-(PS-dN8)-SNA FANA Luciferase (PS-dN8) (Dodecanediol) × 12 graphic file with name d0sc06645a-u10.jpg
FANA-survivin-(PO-dN4)-ASO FANA Survivin (PO-dN4) graphic file with name d0sc06645a-u11.jpg
FANA-survivin-(PO-dN4)-SNA FANA Survivin (PO-dN4) (Dodecanediol) × 12 graphic file with name d0sc06645a-u12.jpg
PS-DNA-ASO Luciferase
PS-survivin-ASO Survivin
PO-DNA-negativeASO(18)
PS-DNA-mmASO Mismatch to luciferase
FANA-(PO-dN4)-mmASO FANA Mismatch to luciferase (PO-dN4)
FANA-(PO-dN4)-mmSNA FANA Mismatch to luciferase (PO-dN4) (Dodecanediol) × 12
FANA-DNA-NegativeASO FANA
FANA-DNA-NegativeSNA FANA (Dodecanediol) × 12
PS-(PO-dN4)-DNA-SNA Luciferase (Dodecanediol) × 12
FANA-APOB-(PO-dN4)-ASO FANA APOB (PO-dN4)
FANA-APOB-(PO-dN4)-SNA FANA APOB (PO-dN4) (Dodecanediol) × 12
Control No strand was used