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. 2021 Jun 7;183:2248–2261. doi: 10.1016/j.ijbiomac.2021.06.017

Fig. 6.

Fig. 6

MD simulation trajectory analysis. (A) RMSD change of LIG_Heavy atoms in MD simulation. (B) RMSD change of S-protein backbone atoms in MD simulation. (C) Change of backbone RMSD of complex system relative to crystal structure position with simulation time. (D) RMSF of residues in the protein during dynamics simulations.