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. 2021 Jan-Feb;153(1-2):182–189. doi: 10.4103/ijmr.IJMR_2855_20

Table.

Details of the best predicted small interfering RNAs (siRNAs) against SARS-CoV-2

Serial number Target region siRNA sequences Free energy of folding Free energy of binding Validation score GC % Tm (concentration) Tm (Cp)
siRNA_1 23339-23357 nt Antisense - UUAUAACACUGACACCACC
Sense - GGUGGUGUCAGUGUUAUAA
1.6 −31.5 0.917 42 80.2 81.7
siRNA_2 24260-24282 nt Antisense - AAACCUAUAAGCCAUUUGCAU
Sense - GCAAAUGGCUUAUAGGUUUAA
1.9 −32.1 0.964 33 82.2 83.5
siRNA_3 24289-24311 nt Antisense - AGAACAUUCUGUGUAACUCCA
Sense - GAGUUACACAGAAUGUUCUCU
1.6 −34.1 0.781 38 80.7 81.6
siRNA_4 24295-24317 nt Antisense - UCAUAGAGAACAUUCUGUGUA
Sense - CACAGAAUGUUCUCUAUGAGA
1.9 −33.2 0.935 35 79.5 79.7

GC, guanine-cytosine; Tm, melting temperature