| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Deposited data | ||
| Raw data for optimisation of rostrocaudal model | (Kirkeby et al., 2012) | N/A |
| Processed data for optimisation of rostrocaudal model | This paper | https://github.com/max-brambach/neural_tube_patterning_paper |
| Data for validation of the 3D model | (Balaskas et al., 2012) | N/A |
| Software and algorithms | ||
| Python 3.7 | Python Software Foundation | https://www.python.org/ |
| matplotlib 3.4.1 | (Hunter, 2007) | https://matplotlib.org/ |
| NumPy 1.20 | (Harris et al., 2020) | https://numpy.org/ |
| SciPy 1.4 | (Virtanen et al., 2020) | https://www.scipy.org/ |
| pandas 1.2.4 | (McKinney, 2010; Pandas Development Team, 2020) | https://pandas.pydata.org/ |
| seaborn 0.11.1 | (Waskom, 2021) | https://seaborn.pydata.org/ |
| MagicVoxel 0.98.2 | ephtracy | https://ephtracy.github.io/ |
| Analysis code | This paper | https://github.com/max-brambach/neural_tube_patterning_paper |
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