Table 8.
(A) | 03/24–06/07/2020 | |||
---|---|---|---|---|
Position | Location | Mutation | Count | Incidence |
241nt | 5´UTR | CG → TG | 215/226 | prevalent |
noneffective | ||||
3,037nt | nsp3 | CT → TT | 224/226 | prevalent |
noneffective | ||||
3,140nt | CC → TC | 13/226 | unique | |
CCT (Proline) → AATCTT (Asparagine Leucine) | ||||
14,408nt | RNA‐dependent RNA polymerase | CT → TT | 225/226 | prevalent |
CCT (Proline) → CTT (Leucine) | ||||
20,268nt | endoRNAse | AG → GG | 32/226 | ES,FR,US, |
noneffective | ZA | |||
23,403nt | Spike glycoprotein | AT → GT | 226/226 | prevalent |
GAT (Aspartic Acid) → GGT (Glycine) | ||||
25,563nt | ORF3a protein | GA → TA | 10/226 | prevalent |
CAGAGC (Glutamine Serine) → CATAGC (Histidine Serine) | ||||
26,750nt | Membrane glycoprotein | CA → TA | 45/226 | unique |
noneffective | ||||
27,415nt | ORF6 protein | GC → TC | 10/226 | unique |
GCA (Alanine) → TCA (Serine) | ||||
28,881nt | Nucleocapsid phosphoprotein | GGG → AAC | 172/226 | prevalent |
AGGGGA (Arginine Glycine) → AAACGA (Lysine Arginine) |
(B) | 01/19/2020–01/20/2021 | |||
---|---|---|---|---|
Position | Location | Mutation | Total Count | Percentage |
30nt | 3´UTR | A → G | 57 | 4.75 |
241nt | C → T | 1,167 | 97.33 | |
1,059nt | nsp2 | C → T | 31 | 2.59 |
3,037nt | nsp3 | C → T | 1,188 | 99.08 |
3,177nt | C → T | 28 | 2.34 | |
3,373nt | C → A | 43 | 3.59 | |
6,874nt | T → G | 72 | 6.01 | |
6,883nt | C → T | 38 | 3.17 | |
8,887nt | nsp4 | A → G | 108 | 9.01 |
11,029nt | nsp6 | G → A | 41 | 3.42 |
11,083nt | G → T | 32 | 2.67 | |
12,316nt | nsp8 | A → G | 28 | 2.34 |
12,886nt | nsp9 | A → G | 39 | 3.25 |
13,599nt | RNA‐dependent RNA polymerase | T → C | 63 | 5.25 |
14,408nt | C → T | 1,180 | 98.42 | |
15,540nt | C → T | 29 | 2.42 | |
19,839nt | endoRNAse | T → C | 105 | 8.76 |
20,268nt | A → G | 47 | 3.92 | |
21,724nt | Spike glycoprotein | G → A | 38 | 3.17 |
21,772nt | C → T | 41 | 3.42 | |
22,020nt | T → C | 73 | 6.09 | |
23,403nt | A → G | 1,195 | 99.67 | |
25,563nt | ORF3a | G → T | 43 | 3.59 |
26,750nt | Membrane glycoprotein | C → T | 53 | 4.42 |
27,415nt | ORF7a | G → T | 34 | 2.84 |
28,253nt | ORF8 | C → T | 32 | 2.67 |
28,881nt | Nucleocapsid phosphoprotein | G → A | 1,079 | 89.99 |
28,882nt | G → A | 1,079 | 89.99 | |
28,883nt | G → C | 1,075 | 89.66 | |
28,905nt | C → T | 62 | 5.17 | |
28,975nt | G → T | 24 | 2 | |
29,518nt | ORF10 | C → T | 49 | 4.09 |
The general design of these Tables follows the outline described in detail in the legend to Table 5 (United States). The number of sequences investigated for SARS‐CoV‐2 mutations is detailed in Tables for individual countries.