Table 12.
(A) | 12/23/2019–03/18/2020* | 03/20–07/22/2020 | |||
---|---|---|---|---|---|
Position | Location | Mutation | Count | Count | Incidence |
241nt | 5´UTR | CG → TG | 0/98 | 23/33 | Prevalent |
noneffective | |||||
3,037nt | nsp3 | CT → TT | 2/99 | 23/33 | Prevalent |
noneffective | |||||
8,782nt | nsp4 | CC → TC | 29/99 | 0/33 | DE,ES,IN,US |
noneffective | |||||
14,408nt | RNA‐dependent RNA polymerase | CT → TT | 2/99 | 19/33 | Prevalent |
CCT (Proline) → CTT (Leucine) | |||||
23,403nt | Spike glycoprotein | AT → GT | 2/99 | 22/33 | Prevalent |
GAT (Aspartic Acid) → GGT (Glycine) | |||||
28,144nt | ORF8 protein | TA → CA | 29/99 | 0/33 | DE,ES,IN,US |
TTA (Leucine) → TCA (Serine) | |||||
28,881nt | Nucleocapsid phosphoprotein | GGG → AAC | 2/99 | 11/33 | Prevalent |
AGGGGA (Arginine Glycine) → AAACGA (Lysine Arginine) |
(B) | 01/19/2020–01/20/2021 | |||
---|---|---|---|---|
Position | Location | Mutation | Total Count | Percentage |
4nt | 5´UTR | A → G | 15 | 2.49 |
241nt | C → T | 68 | 11.28 | |
1,397nt | nsp2 | G → A | 18 | 2.99 |
2,392nt | T → C | 13 | 2.16 | |
3,037nt | nsp3 | C → T | 65 | 10.78 |
6,354nt | C → T | 14 | 2.32 | |
7,075nt | T → C | 14 | 2.32 | |
8,022nt | T → G | 15 | 2.49 | |
8,782nt | nsp4 | C → T | 191 | 31.67 |
10,747nt | 3C‐like proteinase | C → T | 14 | 2.32 |
11,083nt | nsp6 | G → T | 40 | 6.63 |
11,794nt | A → G | 14 | 2.32 | |
14,408nt | RNA‐dependent RNA polymerase | C → T | 55 | 9.12 |
15,324nt | C → T | 13 | 2.16 | |
15,342nt | C → T | 14 | 2.32 | |
15,360nt | C → T | 14 | 2.32 | |
15,666nt | G → A | 14 | 2.32 | |
16,733nt | Helicase | C → T | 14 | 2.32 |
17,373nt | C → T | 26 | 4.31 | |
18,060nt | 3'‐to‐5' exonuclease | C → T | 16 | 2.65 |
21,707nt | spike glycoprotein | C → T | 24 | 3.98 |
21,727nt | C → T | 14 | 2.32 | |
22,020nt | T → C | 16 | 2.65 | |
23,403nt | A → G | 67 | 11.11 | |
25,416nt | ORF3a | C → T | 14 | 2.32 |
26,144nt | G → T | 39 | 6.47 | |
27,213nt | ORF6 | C → T | 15 | 2.49 |
28,144nt | ORF8 | T → C | 212 | 35.16 |
28,688nt | Nucleocapsid phosphoprotein | T → C | 13 | 2.16 |
28,854nt | C → T | 14 | 2.32 | |
28,881nt | G → A | 33 | 5.47 | |
28,882nt | G → A | 31 | 5.14 | |
28,883nt | G → C | 31 | 5.14 | |
29,095nt | C → T | 31 | 5.14 | |
29,742nt | 3´UTR | G → T | 19 | 3.15 |
29,835nt | C → T | 14 | 2.32 |
The general design of these Tables follows the outline described in detail in the legend to Table 5 (United States). The number of sequences investigated for SARS‐CoV‐2 mutations is detailed in Tables for individual countries.