Table 1.
Basic Statistics of the Contigs and Scaffolds
| Specimen R |
Specimen P |
||||
|---|---|---|---|---|---|
| Contigs | Scaffolds | Contigs | Scaffolds | ||
| Total nucleotide length (bp) | 140,229,552 | 140,258,052 | 140,852,390 | 140,915,890 | |
| The number of “N”s in contigs/scaffolds (bp) | 436 | 28,936 | 525 | 64,025 | |
| Number of contigs/scaffolds | 92 | 35 | 234 | 107 | |
| Total nucleotide length in chromosomes | N.A. | 134,327,883 | N.A. | 128,639,392 | |
| N50 (bp) | 2,616,637 | 9,879,317 | 1,343,034 | 8,719,396 | |
| L50 | 19 | 6 | 34 | 7 | |
| N90 (bp) | 921,931 | 6,498,296 | 342,918 | 5,508,368 | |
| L90 | 53 | 13 | 113 | 14 | |
| BUSCO score | Complete | 92.8% | 92.9% | 93.6% | 93.7% |
| Fragmented | 0.8% | 0.9% | 1.2% | 1.1% | |
| Missing | 6.4% | 6.2% | 5.2% | 5.2% | |