Table 1.
Authors | Year | Segregation analysis | In silico pathogenicity assessment | Genotyping of controls | ||
---|---|---|---|---|---|---|
Conservation across species | MAF and zygosity search in public databases (Gnomad, ExAC, 1000 Genomes,..) | Prediction tool (s) for missense | ||||
Humbert et al. | 2006 | No | N.A | − | +, Unspecified tool | + |
Mackay et al. | 2010 | Yes | N.A | − | − | + |
Abu-safieh et al. | 2013 | Yes | + | − | + | + |
Al rashed et al. | 2012 | Yes | − | − | +, Unspecified tool | − |
Dessalces et al. | 2013 | Yes | N.A | − | − | + |
Davidson et al. | 2013 | Yes | + | + | + | + |
Coppieters et al. | 2014 | Yes | − | No | + | − |
Méjécase et al. | 2017 | No | + | + | + | − |
Gerth et al. | 2017 | Yes | − | + | +, Unspecified tool | − |
Astuti et al. | 2018 | No | + | + | + | + |
Albarry et al. | 2019 | Yes | − | − | +, Unspecified tool | − |
Abu-Ameerh et al. | 2019 | Yes | + | + | + | − |
Azab et al. | 2019 | Yes | − | + | + | − |
Patel et al. | 2016 | Yes | + | + | + | − |
Patel et al. | 2018 | Yes | − | + | + | − |
Khan et al. | 2015 | No | N.A | − | + | + |
Katsanis et. al | 2001 | Yes | + | − | − | + |
Aldahmesh et al. | 2009 | Yes | + | − | − | + |
Nair et al. | 2017 | Yes | N.A | + | N.A | − |
Hmani-Aifa et al. | 2009 | Yes | + | − | − | + |
Ksantini et al. | 2012 | Yes | − | − | − | + |
Habibi et al. | 2017 | Yes | − | + | + | − |
Habibi et al. | 2016 | Yes | + | + | + | − |
Audo et al. | 2018 | Yes | + | + | + | − |
Audo et al. | 2017 | Yes | + | + | + | − |
Zobor et al. | 2014 | Yes | − | − | − | + |
Hashmi et al. | 2018 | Yes | N.A | − | N.A | − |
Jalkh et al. | 2014 | Yes | − | − | + | − |
Khan et al. | 2019 | Yes | − | − | − | − |
Khan AO | 2019 | Yes | − | − | − | − |
In many studies, the conservation across species and predictions tools were not applicable since the identified variants were either insertion/deletions, splice sites, or nonsense.
MAF minor allele frequency, + yes, − no, N.A not applicable.