Table 4.

HLA II antigenic epitopes predicted using Rankpep.

Sl. No	Alleles	SARS-CoV1	SARS-CoV2	MERS-CoV
1	HLADRB10101	68–76 YVFIKRSDA	71–79 IKRSDARTA 68–76 YVFIKRSDA	108–116 YSSSANGSL 99–107 NPFMVNQLA 3–11 FVAGVTAQG 80–88 TRHLPGPRV
2	HLADRB10401	157–165 YEQNWNTKH 97–105 YGRSGITLG 68–76 YVFIKRSDA 116–124 IAYRNVLLR	97–105 YGRSGETLG 157–165 FQENWNTKH 68–76 YVFIKRSDA 55–63 EVEKGVLPQ	3–11 FVAGVTAQG 2–10 SFVAGVTAQ 106–114 YERDNTSCP 114–122 GSLVGTTLQ
3	HLADRB10701	-	-	95–103 IACENPFMV
4	HLADRB11101	159–167 QNWNTKHGS 163–171 TKHGSGALR	159–167 ENWNTKHSS 169–177 VTRELMREL	59–67 VKAMLLKKE 182–190 YAQNLLKKL
5	HLADRB11501	54–62 VELEKGVLP 20–28 VLQVRDVLV 133–141 GHSYGIDLK	54–62 VEVEKGVLP 20–28 VLQVRDVLV 133–141 GHSYGADLK 69–77 VFIKRSDAR	126–134 IGMFFPYDI 56–64 YEVVKAMLL