Table 1.
HNSCC patient and tumor characteristics
Specimen ID | Tumor anatomic location | Histologic subtype | Patient age at diagnosis (years) | Tumor stagea | Tumor HPV statusb | Tumor cell PD-L1 statusc | CPS for PD-L1d | ||
---|---|---|---|---|---|---|---|---|---|
T | N | M | |||||||
1 | Base of tongue | NK | 38 | 3 | 0 | 0 | + | – | 10 |
2 | Base of tongue | NK | 45 | 3 | 0 | 0 | + | – | 20 |
3 | Tonsil | NK | 70 | 3 | 0 | 0 | + | – | 10 |
4 | Tonsil | NK | 61 | 1 | 2B | 0 | + | – | 20 |
5 | Tonsil | C | 73 | 4A | 2B | 0 | – | – | 20 |
6 | Tonsil | C | 64 | 2 | 0 | 0 | – | – | 0 |
7 | Base of tongue | NK | 60 | 4A | 2C | 0 | – | – | 10 |
8 | Base of tongue | C | 63 | 2 | 0 | 0 | – | – | 20 |
9 | Base of tongue | C | 28 | 4 | 0 | 0 | + | + | 10 |
10 | Base of tongue | NK | 53 | 2 | 1 | 0 | + | + | 20 |
11 | Tonsil | NK | 61 | 3 | 3 | 0 | + | + | 100 |
12 | Base of tongue | NK | 51 | 2 | 2A | 0 | + | + | 100 |
13 | Tonsil | NK | 71 | 1 | 2A | 0 | + | + | 20 |
14 | Tonsil | NK | 61 | 1 | 1 | 0 | + | + | 60 |
15 | Tonsil | C | 49 | 4A | 2B | 0 | + | + | 20 |
16 | Tonsil | NK | 56 | 1 | 1 | 0 | + | + | 50 |
17 | Tonsil | NK | 51 | 2 | 2B | 0 | + | + | 90 |
18 | Oropharynx | C | 34 | 4A | 0 | 0 | – | + | 40 |
19 | Base of tongue | C | 39 | 4B | 1 | 0 | – | + | 20 |
20 | Base of tongue | C | 34 | 4A | 2 | 0 | – | + | 100 |
21 | Base of tongue | C | 51 | 4 | 0 | 0 | – | + | 50 |
22 | Tonsil | C | 64 | 3 | 3 | 0 | – | + | 5 |
23 | Soft palate | C | 50 | 4 | 2C | 0 | – | + | 10 |
24 | Tonsil | C | 56 | 4 | 3 | 0 | – | + | 5 |
25 | Tonsil | NK | 57 | 3 | 2C | 0 | – | + | 10 |
26 | Tonsil | C | 55 | 4B | 2B | 0 | – | + | 40 |
27 | Tonsil | C | 74 | 3 | 2B | 0 | – | + | 70 |
NK non-keratinizing, C conventional
aAmerican Joint Committee on Cancer (AJCC) staging
bHPV status determined by p16 IHC and confirmed by HPV genotyping, as described in Methods. All had the HPV16 genotype except for tumor #14, which was HPV58
cTumors are defined as PD-L1+ if ≥ 5% of tumor cells express membranous (cell surface) PD-L1 by IHC
dCPS is defined as the percentage of PD-L1 TCs and ICs relative to the total number of tumor cells