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. 2021 Jun 10;135:104560. doi: 10.1016/j.compbiomed.2021.104560

Table 3.

List of major interactions observed between EGCG and wild protein.

Time frame Interaction involved Amino acid involved Distance
0 ns
  • 1.

    Pi-Pi T-shaped

  • 2.

    Pi-Alkyl

  • 3.

    Alkyl

  • 4.

    Conventional H-bond

  • 1.

    TYR1110

  • 2.

    TYR1110

  • 3.

    PRO1112

  • 4.

    ASN919

5.45 Å
5.42 Å
5.20 Å
2.15 Å
5 ns
  • 1.

    Pi-Pi T-shaped

  • 2.

    Alkyl

  • 3.

    Conventional H-bond

  • 1.

    TYR1110

  • 2.

    PRO1112

  • 3.

    ASN919

5.42 Å
5.16 Å
2.15 Å
10 ns
  • 1.

    Pi-Pi T-shaped

  • 2.

    Pi-Alkyl

  • 3.

    Alkyl

  • 4.

    Pi-Pi Stacked

  • 1.

    TYR1110

  • 2.

    TYR1110

  • 3.

    PRO1112

  • 4.

    Between two aromatic rings of the ligand

5.46 Å
5.39 Å
5.23 Å
4.42 Å
15 ns
  • 1.

    Pi-Pi T-shaped

  • 2.

    Pi-Alkyl

  • 3.

    Alkyl

  • 4.

    Pi-Pi Stacked

  • 1.

    TYR1110

  • 2.

    TYR1110

  • 3.

    PRO1112

  • 4.

    Between two aromatic rings of the ligand

5.42 Å
5.27 Å
5.08 Å
4.20 Å
20 ns
  • 1.

    Pi-Pi T-shaped

  • 2.

    Alkyl

  • 3.

    Pi-Pi Stacked

  • 1.

    TYR1110

  • 2.

    PRO1112

  • 3.

    Between two aromatic rings of the ligand

5.52 Å
4.96 Å
4.33 Å