Table 2.
Analysing the similarity between the R2DT diagrams and the templates.
| Data source | Number of nucleotides positioned exactly as in template | Number of nucleotides inserted compared to template | Number of nucleotides requiring repositioning | Total number of displayed nucleotides | Number of sequences | Number of diagrams |
|---|---|---|---|---|---|---|
| DictyBase | 9497 (83.1%) | 1188 (10.4%) | 746 (6.5%) | 11,431 | 148 | 123 |
| FlyBase | 35,876 (92.6%) | 1485 (3.8%) | 184 (0.5%) | 38,752 | 458 | 236 |
| MGI | 348,088 (91.6%) | 19,936 (5.2%) | 12,111 (3.2%) | 380,135 | 3166 | 3085 |
| PomBase | 21,498 (85.9%) | 2660 (10.6%) | 878 (3.5%) | 25,036 | 191 | 156 |
| SGD | 26,325 (89.2%) | 2433 (8.2%) | 746 (2.5%) | 29,504 | 188 | 161 |
| TAIR | 46,925 (86.7%) | 3160 (5.8%) | 4,057 (7.5%) | 54,142 | 623 | 483 |
| WormBase | 35,510 (91.7%) | 1614 (4.2%) | 1610 (4.2%) | 38,734 | 639 | 376 |
| HGNC | 135,021 (94.9%) | 2639 (1.9%) | 4685 (3.3%) | 142,345 | 972 | 869 |
| EcoCyc | 44,913 (97.%) | 1036 (2.2%) | 367 (0.8%) | 46,316 | 174 | 174 |
| Total | 703,653 (91.8%) | 36,151 (4.7%) | 25,384 (3.3%) | 766,395 | 6559 | 5663 |
| RNAcentral total | 9,038,893,528 (94.7%) | 261,968,286 (2.7%) | 241,927,491 (2.5%) | 9,542,789,305 | 16,107,505 | 13,384,186 |
The counts indicate the number of nucleotides across all diagrams that match that class, while the percentages indicate the fraction of total displayed nucleotides.