Official websites use .gov
A
.gov website belongs to an official
government organization in the United States.
Secure .gov websites use HTTPS
A lock (
) or https:// means you've safely
connected to the .gov website. Share sensitive
information only on official, secure websites.
Tools to Investigate Differentially Accessible Regions
| Languages | Notes | Docs | Citation | |
|---|---|---|---|---|
| DAStk | Python | Identifies changes in transcription factor activity by looking at changes in chromatin accessibility | +++ |
Tripodi et al. (2018) Last updated: 2020 |
| diffTF | Python; R | Identifies differential transcription factors. Can operate in basic mode with just chromatin accessibility or in classification mode where it integrates RNA-seq. | +++ |
Berest et al. (2019) Last updated: 2020 |
