Table 4.
Residual analysis using hydrogen bonding.
| Death Domains | Interactive residues of docked complexes | ||
|---|---|---|---|
| ClusPro | HawkDock | ZDOCK | |
| TNFR1 | Arg368, Asp400, Glu409, Glu410, Arg41, | Leu402, Cys404, Met399 | Asp400, Trp342, Lys343, Arg341 |
| MADD | Asp26, Asp29, His37, Ser41, Arg54, Arg58 | Lys55, Arg58, Arg59, His65 | Gly1, Met2, Arg59, Ile66, Tyr70 |