TABLE 8.
Meiotic recombination sites within the MHC class II region annotated by the NCBI Genome Data Viewer.
| Meiotic Recombination Site (size nt) | GeneID | Nearest Gene | TEs at site |
| 32835539-32837158 (1620) | 107648851 | TAP2 | GA-rich repeats/Tigger3a/MER96 |
| LOC107648851 | |||
| 32836099-32837694 (1596) | 107648851 | TAP2 | Tigger3a/MER96 |
| 32836523-32837522 (1000) | 107648851 | TAP2 | Tigger3a/MER96 |
| 32931739-32933079 (1341) | 107648859 | 3′ncr-DMB | L3/(CT)n/(CA)n |
| 32931873-32933172 (1300) | 107648859 | 3′ncr-DMB | L3/(CT)n/(CA)n/AluSx |
| 32935423-32936222 (800) | 107648856 | DMB | (TCCCAGC)n |
| 33002673-33005823 (3151) | 107648864 | DOA | HAL1/MLT10/AluSc/MER5/AluJr |
| 33005073-33006372 (1300) | 107648864 | DOA | AluSc/MER5/AluJr/MER5 |
| 33008773-33010672 (1900) | 107648863 | DOA | MIR/LTR33/MER5 |
| 33010075-33011244 (1170) | 107648863 | DOA | LTR33/MER5/L2a/L1ME |
| 33010401-33011244 (844) | 107648863 | DOA | MER5/L2a/L1ME |
| 33051181-33057716 (6536) | 1105999562 | DOA/DPA1 | HERVK22-int |
| 33052612-33056830 (4219) | 1105999562 | DOA/DPA1 | HERVK22-int |
| 33055396-33057095 (1700) | 1105999562 | DOA/DPA1 | HERVK22-int |
| 33055689-33056973 (1285) | 1105999562 | DOA/DPA1 | HERVK22-int |