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. 2021 Jun 11;12:3560. doi: 10.1038/s41467-021-23865-8

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — a Non-pharmaceutical interventions (NPIs) suites: no intervention (left column), all interventions (right column) and the ten most frequently used NPI suites in counties in the United States (middle columns; ordered by number of NPIs implemented (red; otherwise, blue) in each suite). Numbers below the columns are percentages of county-weeks in the study in which the suites were active. b R_eff with different NPI suites (n = 34,778 county-weeks). Median (cross), interquartile range (boxes) and 95% quantile range (vertical lines) of R_eff were distributions of predictions from the main model fitted with generalized estimation equations (GEEs, red, Fig. 3a), GEEs with NPIs fitted as suites (brown), and boosted decision tree (XGBoost individual, purple). X-axes are NPI suites that were shown in a. Horizontal dashed line indicates the threshold of one. Data are presented as median, interquartile, and 95% quantiles.