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. 2021 Mar 12;140(7):1011–1029. doi: 10.1007/s00439-021-02268-1

Table 4.

Runs of homozygosity analysis results

Population NSEG Mb MbA Fhat1 Fhat2 Fhat3
SAS 44.7 [1.8] 193.5 [11.1] 3.93 [0.10] 0.098 [0.005] 0.106 [0.005] 0.102 [0.005]
EUR 19.5 [1.4] 31.9 [2.7] 1.62 [0.05] 0.037 [0.016] 0.030 [0.010] 0.034 [0.011]
FIN all 24.6 [0.8] 46.8 [2.0] 1.88 [0.04] 0.025 [0.003] 0.035 [0.004] 0.030 [0.002]
FIN Kainuu 26.1 [1.0] 50.9 [2.4] 1.94 [0.04] 0.030 [0.004] 0.033 [0.005] 0.032 [0.002]
FIN Western 24.3 [1.4] 45.1 [4.0] 1.85 [0.11] 0.017 [0.005] 0.049 [0.006] 0.033 [0.005]

NSEG Number of runs of homozygosity (minimum 1 Mb)

Mb Total length of runs (Mb)

MbA Average length of runs (Mb)

Fhat1 inbreeding coefficient 1: Variance-standardized relationship minus 1

Fhat2 inbreeding coefficient 2: Excess homozygosity-based inbreeding estimate

Fhat3 inbreeding coefficient 3: Estimate based on correlation between uniting gametes

brackets indicated standard error of mean

EUR: Non-Finnish European ancestry (outbred); SAS: South Asian ancestry (inbred); FIN: Finnish ancestry