Table 4.
Runs of homozygosity analysis results
| Population | NSEG | Mb | MbA | Fhat1 | Fhat2 | Fhat3 |
|---|---|---|---|---|---|---|
| SAS | 44.7 [1.8] | 193.5 [11.1] | 3.93 [0.10] | 0.098 [0.005] | 0.106 [0.005] | 0.102 [0.005] |
| EUR | 19.5 [1.4] | 31.9 [2.7] | 1.62 [0.05] | 0.037 [0.016] | 0.030 [0.010] | 0.034 [0.011] |
| FIN all | 24.6 [0.8] | 46.8 [2.0] | 1.88 [0.04] | 0.025 [0.003] | 0.035 [0.004] | 0.030 [0.002] |
| FIN Kainuu | 26.1 [1.0] | 50.9 [2.4] | 1.94 [0.04] | 0.030 [0.004] | 0.033 [0.005] | 0.032 [0.002] |
| FIN Western | 24.3 [1.4] | 45.1 [4.0] | 1.85 [0.11] | 0.017 [0.005] | 0.049 [0.006] | 0.033 [0.005] |
NSEG Number of runs of homozygosity (minimum 1 Mb)
Mb Total length of runs (Mb)
MbA Average length of runs (Mb)
Fhat1 inbreeding coefficient 1: Variance-standardized relationship minus 1
Fhat2 inbreeding coefficient 2: Excess homozygosity-based inbreeding estimate
Fhat3 inbreeding coefficient 3: Estimate based on correlation between uniting gametes
brackets indicated standard error of mean
EUR: Non-Finnish European ancestry (outbred); SAS: South Asian ancestry (inbred); FIN: Finnish ancestry