TABLE 1.
Genomic information and accession numbers for five nitrogen-fixing bacterial strains isolated from switchgrass rootsa
| Bacterial isolateb | Genome size (bp) | No. of scaffolds | Scaffold N50 (bp) | No. of sequencing reads | Total bp sequenced | Total no. of genes | G+C content (%) | GenBank accession no. | SRA accession no. |
|---|---|---|---|---|---|---|---|---|---|
| Kosakonia radicincitans NFIX03 | 5,597,196 | 34 | 288,533 | 6,831,996 | 1,024,799,400 | 5,357 | 53.99 | FPJU00000000 | SRX2122634 |
| Kosakonia radicincitans NFIX09 | 5,483,348 | 14 | 3,027,540 | 6,152,934 | 922,940,100 | 5,280 | 54.03 | FOHP01000000 | SRX2122594 |
| Klebsiella quasipneumoniae NFIX19 | 5,217,298 | 21 | 373,421 | 6,826,716 | 1,024,007,400 | 4,910 | 58.21 | FOAU00000000 | SRX2122607 |
| Klebsiella quasipneumoniae NFIX42 | 5,292,309 | 21 | 531,623 | 6,097,090 | 914,563,500 | 5,034 | 58.08 | FMVG00000000 | SRX2122649 |
| Klebsiella quasipneumoniae NFIX56 | 5,439,064 | 33 | 286,212 | 6,642,240 | 996,336,000 | 5,157 | 57.93 | FPJQ00000000 | SRX2122658 |
a
Default parameters were used for all software unless otherwise specified.
b
Strains were classified on the basis of ≥99% similarity with 16S rRNA genomic sequences.